RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 MRPL35Q9NZE8 188 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-221ENST00000582240 PCLOQ9Y6V0 5065 aa13.07□□□□□ -0.32
PPP4R1-221ENST00000582240 SERF1AO75920 110 aa13.07□□□□□ -0.32
PPP4R1-221ENST00000582240 PTTG1IPP53801 180 aa13.07□□□□□ -0.32
PPP4R1-221ENST00000582240 PACRGQ96M98 296 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-221ENST00000582240 PLAC8Q9NZF1 115 aa13.07□□□□□ -0.32
PPP4R1-221ENST00000582240 NUPR1O60356 82 aa13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 ATP5LO75964 103 aa13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 PLA2G1BP04054 148 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 PRSS2P07478 247 aa13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
PPP4R1-221ENST00000582240 F8WDY8 70 aa13.05□□□□□ -0.32
PPP4R1-221ENST00000582240 HSBP1O75506 76 aa13.05□□□□□ -0.32
PPP4R1-221ENST00000582240 C9orf116Q5BN46 136 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-221ENST00000582240 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
PPP4R1-221ENST00000582240 IGLV5-45A0A087WSX0 123 aa13.04□□□□□ -0.32
PPP4R1-221ENST00000582240 SMIM1B2RUZ4 78 aa13.04□□□□□ -0.32
PPP4R1-221ENST00000582240 KRTAP10-4P60372 401 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-221ENST00000582240 IGLC3P0DOY3 106 aa13.03□□□□□ -0.32
PPP4R1-221ENST00000582240 RPL37AP61513 92 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-221ENST00000582240 PKIGQ9Y2B9 76 aa13.03□□□□□ -0.32
PPP4R1-221ENST00000582240 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
PPP4R1-221ENST00000582240 COA6Q5JTJ3 125 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-221ENST00000582240 Q8IZM0 81 aa13.02□□□□□ -0.33
PPP4R1-221ENST00000582240 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.33
PPP4R1-221ENST00000582240 CKS1BP61024 79 aa13.01□□□□□ -0.33
PPP4R1-221ENST00000582240 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
PPP4R1-221ENST00000582240 Q6ZRP5 223 aa13.01□□□□□ -0.33
PPP4R1-221ENST00000582240 LINC00474Q9P2X8 69 aa13.01□□□□□ -0.33
PPP4R1-221ENST00000582240 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
PPP4R1-221ENST00000582240 C11orf86A6NJI1 115 aa13□□□□□ -0.33
PPP4R1-221ENST00000582240 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
PPP4R1-221ENST00000582240 COX7B2Q8TF08 81 aa13□□□□□ -0.33
PPP4R1-221ENST00000582240 CHTOPQ9Y3Y2 248 aaKnown RBP13□□□□□ -0.33
PPP4R1-221ENST00000582240 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
PPP4R1-221ENST00000582240 SRRM2Q9UQ35 2752 aaKnown RBP12.98□□□□□ -0.33
PPP4R1-221ENST00000582240 H3BRM9 83 aa12.97□□□□□ -0.33
PPP4R1-221ENST00000582240 TLX1NBP0CAT3 122 aa12.97□□□□□ -0.33
PPP4R1-221ENST00000582240 FAM168BA1KXE4 195 aa12.96□□□□□ -0.33
PPP4R1-221ENST00000582240 H0Y8G0 127 aa12.96□□□□□ -0.33
PPP4R1-221ENST00000582240 FABP4P15090 132 aa12.96□□□□□ -0.33
PPP4R1-221ENST00000582240 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-221ENST00000582240 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
PPP4R1-221ENST00000582240 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
PPP4R1-221ENST00000582240 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
PPP4R1-221ENST00000582240 TRAV12-1A0A0B4J245 112 aa12.93□□□□□ -0.34
PPP4R1-221ENST00000582240 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
PPP4R1-221ENST00000582240 F8VRH5 84 aa12.93□□□□□ -0.34
PPP4R1-221ENST00000582240 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
PPP4R1-221ENST00000582240 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-221ENST00000582240 CXCL5P42830 114 aa12.91□□□□□ -0.34
PPP4R1-221ENST00000582240 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-221ENST00000582240 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-221ENST00000582240 KRTAP7-1Q8IUC3 87 aa12.9□□□□□ -0.34
PPP4R1-221ENST00000582240 PKHD1L1Q86WI1 4243 aa12.89□□□□□ -0.35
PPP4R1-221ENST00000582240 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
PPP4R1-221ENST00000582240 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-221ENST00000582240 ODF1Q14990 250 aa12.88□□□□□ -0.35
PPP4R1-221ENST00000582240 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
PPP4R1-221ENST00000582240 HSPB8Q9UJY1 196 aa12.87□□□□□ -0.35
PPP4R1-221ENST00000582240 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
PPP4R1-221ENST00000582240 ZNF625Q96I27 306 aaPredicted RBP12.86□□□□□ -0.35
PPP4R1-221ENST00000582240 PRR3P79522 188 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-221ENST00000582240 KRTAP11-1Q8IUC1 163 aa12.84□□□□□ -0.35
PPP4R1-221ENST00000582240 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
PPP4R1-221ENST00000582240 PFN2P35080 140 aa12.83□□□□□ -0.36
PPP4R1-221ENST00000582240 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.36
PPP4R1-221ENST00000582240 C5orf52A6NGY3 159 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 M0QXV9 152 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 S100A6P06703 90 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 MYCBP2O75592 4640 aa12.8□□□□□ -0.36
PPP4R1-221ENST00000582240 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-221ENST00000582240 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
PPP4R1-221ENST00000582240 ERG28Q9UKR5 140 aa12.78□□□□□ -0.36
PPP4R1-221ENST00000582240 DPM2O94777 84 aa12.77□□□□□ -0.37
PPP4R1-221ENST00000582240 C22orf24Q9Y442 160 aa12.77□□□□□ -0.37
PPP4R1-221ENST00000582240 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
PPP4R1-221ENST00000582240 SYS1-DBNDD2H3BUS1 97 aa12.76□□□□□ -0.37
PPP4R1-221ENST00000582240 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
PPP4R1-221ENST00000582240 IGKCP01834 107 aa12.75□□□□□ -0.37
PPP4R1-221ENST00000582240 UBE2BP63146 152 aa12.75□□□□□ -0.37
PPP4R1-221ENST00000582240 C1orf137Q5JT78 98 aa12.75□□□□□ -0.37
PPP4R1-221ENST00000582240 FAT3Q8TDW7 4589 aa12.75□□□□□ -0.37
PPP4R1-221ENST00000582240 PLNP26678 52 aa12.74□□□□□ -0.37
PPP4R1-221ENST00000582240 TSPEAR-AS2P59090 65 aa12.74□□□□□ -0.37
PPP4R1-221ENST00000582240 LRP1Q07954 4544 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-221ENST00000582240 KRTAP29-1A8MX34 341 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-221ENST00000582240 J3QL48 77 aa12.73□□□□□ -0.37
PPP4R1-221ENST00000582240 S100A2P29034 98 aa12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 LINC00158P58513 81 aa12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 LINC01545Q5VT33 79 aa12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 PET117Q6UWS5 81 aa12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 TMA7Q9Y2S6 64 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-221ENST00000582240 LEPROTO15243 131 aa12.71□□□□□ -0.37
PPP4R1-221ENST00000582240 KRTDAPP60985 99 aa12.71□□□□□ -0.37
PPP4R1-221ENST00000582240 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms