RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 MALP21145 153 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 Q8IZM0 81 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 H3BUT2 72 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 EIF4EBP3O60516 100 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 PRSS2P07478 247 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CCL18P55774 89 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CIRBPQ14011 172 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CFC1BP0CG36 223 aa9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CFC1P0CG37 223 aa9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 RPL24P83731 157 aaKnown RBP9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
CDK5RAP3-218ENST00000580391 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
CDK5RAP3-218ENST00000580391 VAMP3Q15836 100 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CFAP161Q6P656 301 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IFITM1P13164 125 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 Q9HAA7 133 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CKS1BP61024 79 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 MIR7-3HGQ8N6C7 128 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PFN2P35080 140 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 KLK5Q9Y337 293 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 TSPAN13O95857 204 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CXCL5P42830 114 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00158P58513 81 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 TENM2Q9NT68 2774 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 NUPR2A6NF83 97 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 FABP2P12104 132 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 FBN3Q75N90 2809 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UBE2V1Q13404 147 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 H7C2G1 150 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 K7EP34 96 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-218ENST00000580391 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
CDK5RAP3-218ENST00000580391 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 RPL13AP40429 203 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 Q1RN00 199 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 COX17Q14061 63 aa9.82□□□□□ -0.84
CDK5RAP3-218ENST00000580391 GTF2H5Q6ZYL4 71 aa9.82□□□□□ -0.84
CDK5RAP3-218ENST00000580391 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
CDK5RAP3-218ENST00000580391 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-218ENST00000580391 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 Q6ZRU5 148 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 RMI2Q96E14 147 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 PSMB2P49721 201 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 TRIAP1O43715 76 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 USP17L23D6RBM5 183 aa9.77□□□□□ -0.84
CDK5RAP3-218ENST00000580391 TGP01266 2768 aa9.77□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
CDK5RAP3-218ENST00000580391 H3BMG7 143 aa9.76□□□□□ -0.85
CDK5RAP3-218ENST00000580391 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
CDK5RAP3-218ENST00000580391 LECT2O14960 151 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 Q8NDZ9 215 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TCL1BO95988 128 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
CDK5RAP3-218ENST00000580391 MUC7Q8TAX7 377 aa9.74□□□□□ -0.85
CDK5RAP3-218ENST00000580391 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms