RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 Q8N8P6 123 aa10.64□□□□□ -0.71
MKS1-209ENST00000580127 AMELXQ99217 191 aa10.64□□□□□ -0.71
MKS1-209ENST00000580127 GEMIN7Q9H840 131 aaKnown RBP10.64□□□□□ -0.71
MKS1-209ENST00000580127 XAGE1AQ9HD64 81 aa10.64□□□□□ -0.71
MKS1-209ENST00000580127 F8VRH5 84 aa10.63□□□□□ -0.71
MKS1-209ENST00000580127 MRPL55Q7Z7F7 128 aaKnown RBP10.63□□□□□ -0.71
MKS1-209ENST00000580127 TYMSOSQ8TAI1 123 aa10.62□□□□□ -0.71
MKS1-209ENST00000580127 BCE1O60756 84 aa10.61□□□□□ -0.71
MKS1-209ENST00000580127 CXCL5P42830 114 aa10.61□□□□□ -0.71
MKS1-209ENST00000580127 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
MKS1-209ENST00000580127 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
MKS1-209ENST00000580127 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
MKS1-209ENST00000580127 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
MKS1-209ENST00000580127 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
MKS1-209ENST00000580127 IGIPA6NJ69 53 aa10.58□□□□□ -0.72
MKS1-209ENST00000580127 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
MKS1-209ENST00000580127 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
MKS1-209ENST00000580127 ANAPC16Q96DE5 110 aa10.57□□□□□ -0.72
MKS1-209ENST00000580127 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
MKS1-209ENST00000580127 PNRC1Q12796 327 aaPredicted RBP10.55□□□□□ -0.72
MKS1-209ENST00000580127 LINC00167Q96N53 147 aa10.55□□□□□ -0.72
MKS1-209ENST00000580127 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
MKS1-209ENST00000580127 UBE2AP49459 152 aa10.54□□□□□ -0.72
MKS1-209ENST00000580127 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
MKS1-209ENST00000580127 NKAPP1Q8N9T2 125 aa10.54□□□□□ -0.72
MKS1-209ENST00000580127 A0A087X002 238 aa10.53□□□□□ -0.72
MKS1-209ENST00000580127 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
MKS1-209ENST00000580127 ERASQ7Z444 233 aa10.52□□□□□ -0.73
MKS1-209ENST00000580127 COX7B2Q8TF08 81 aa10.52□□□□□ -0.73
MKS1-209ENST00000580127 TOMM6Q96B49 74 aa10.52□□□□□ -0.73
MKS1-209ENST00000580127 SCGB3A1Q96QR1 104 aa10.52□□□□□ -0.73
MKS1-209ENST00000580127 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
MKS1-209ENST00000580127 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
MKS1-209ENST00000580127 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
MKS1-209ENST00000580127 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
MKS1-209ENST00000580127 RAB5BP61020 215 aa10.49□□□□□ -0.73
MKS1-209ENST00000580127 CTAG1AP78358 180 aa10.49□□□□□ -0.73
MKS1-209ENST00000580127 MUC2Q02817 5179 aa10.48□□□□□ -0.73
MKS1-209ENST00000580127 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
MKS1-209ENST00000580127 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
MKS1-209ENST00000580127 CDIP1Q9H305 208 aa10.48□□□□□ -0.73
MKS1-209ENST00000580127 IGLV5-37A0A075B6J1 123 aa10.47□□□□□ -0.73
MKS1-209ENST00000580127 ATP5LO75964 103 aa10.47□□□□□ -0.73
MKS1-209ENST00000580127 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
MKS1-209ENST00000580127 H3BRM9 83 aa10.46□□□□□ -0.73
MKS1-209ENST00000580127 KRTAP9-2Q9BYQ4 174 aa10.46□□□□□ -0.73
MKS1-209ENST00000580127 ANAPC11Q9NYG5 84 aa10.46□□□□□ -0.73
MKS1-209ENST00000580127 RAB14P61106 215 aa10.44□□□□□ -0.74
MKS1-209ENST00000580127 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
MKS1-209ENST00000580127 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
MKS1-209ENST00000580127 IGLV7-46A0A075B6I9 117 aa10.42□□□□□ -0.74
MKS1-209ENST00000580127 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
MKS1-209ENST00000580127 PMVKQ15126 192 aa10.42□□□□□ -0.74
MKS1-209ENST00000580127 KRTAP13-2Q52LG2 175 aa10.42□□□□□ -0.74
MKS1-209ENST00000580127 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
MKS1-209ENST00000580127 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
MKS1-209ENST00000580127 IGKV2-28A0A075B6P5 120 aa10.41□□□□□ -0.74
MKS1-209ENST00000580127 IGKV2D-28P01615 120 aa10.41□□□□□ -0.74
MKS1-209ENST00000580127 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
MKS1-209ENST00000580127 TPRXLQ17RH7 258 aa10.41□□□□□ -0.74
MKS1-209ENST00000580127 KIAA1644Q3SXP7 199 aa10.41□□□□□ -0.74
MKS1-209ENST00000580127 PFN2P35080 140 aa10.4□□□□□ -0.74
MKS1-209ENST00000580127 FAM19A1Q7Z5A9 133 aa10.4□□□□□ -0.74
MKS1-209ENST00000580127 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
MKS1-209ENST00000580127 ADCYAP1P18509 176 aa10.39□□□□□ -0.75
MKS1-209ENST00000580127 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
MKS1-209ENST00000580127 SPAG11AQ6PDA7 123 aa10.38□□□□□ -0.75
MKS1-209ENST00000580127 SMCO4Q9NRQ5 59 aa10.38□□□□□ -0.75
MKS1-209ENST00000580127 COX17Q14061 63 aa10.37□□□□□ -0.75
MKS1-209ENST00000580127 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
MKS1-209ENST00000580127 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
MKS1-209ENST00000580127 A0A1B0GVG6 124 aa10.36□□□□□ -0.75
MKS1-209ENST00000580127 PRLHP81277 87 aa10.36□□□□□ -0.75
MKS1-209ENST00000580127 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
MKS1-209ENST00000580127 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
MKS1-209ENST00000580127 TMEM126AQ9H061 195 aa10.36□□□□□ -0.75
MKS1-209ENST00000580127 LINC01546A6NGU7 62 aa10.35□□□□□ -0.75
MKS1-209ENST00000580127 S100PP25815 95 aa10.35□□□□□ -0.75
MKS1-209ENST00000580127 SFTA2Q6UW10 78 aa10.35□□□□□ -0.75
MKS1-209ENST00000580127 NDUFA6P56556 154 aa10.34□□□□□ -0.75
MKS1-209ENST00000580127 COX19Q49B96 90 aa10.34□□□□□ -0.75
MKS1-209ENST00000580127 SND1-IT1Q9HBX3 110 aa10.34□□□□□ -0.75
MKS1-209ENST00000580127 SCO1O75880 301 aa10.33□□□□□ -0.76
MKS1-209ENST00000580127 PLEKHB2Q96CS7 222 aa10.33□□□□□ -0.76
MKS1-209ENST00000580127 PPDPFQ9H3Y8 114 aa10.33□□□□□ -0.76
MKS1-209ENST00000580127 ERG28Q9UKR5 140 aa10.33□□□□□ -0.76
MKS1-209ENST00000580127 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
MKS1-209ENST00000580127 VPREB1P12018 145 aa10.32□□□□□ -0.76
MKS1-209ENST00000580127 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
MKS1-209ENST00000580127 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
MKS1-209ENST00000580127 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
MKS1-209ENST00000580127 HIGD2AQ9BW72 106 aa10.3□□□□□ -0.76
MKS1-209ENST00000580127 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
MKS1-209ENST00000580127 M0R378 163 aa10.29□□□□□ -0.76
MKS1-209ENST00000580127 FP248Q71RG6 208 aaPredicted RBP10.29□□□□□ -0.76
MKS1-209ENST00000580127 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
MKS1-209ENST00000580127 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
MKS1-209ENST00000580127 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
MKS1-209ENST00000580127 C3orf22Q8N5N4 141 aa10.26□□□□□ -0.77
MKS1-209ENST00000580127 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms