RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 C1orf137Q5JT78 98 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 ZCCHC23Q6ZST2 131 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 OR10AG1Q8NH19 301 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 LSM10Q969L4 123 aaKnown RBP1.67□□□□□ -2.14
KPNB1-208ENST00000580019 HERC1Q15751 4861 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
KPNB1-208ENST00000580019 MED12Q93074 2177 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 LCE6AA0A183 80 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 TCRBV3S1A0A5B6 114 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 FAM24AA6NFZ4 105 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 OOSP1A8MZH6 123 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 H3BRN7 92 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 PIRTP0C851 137 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 COX7CP15954 63 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 POLR2JP52435 117 aaKnown RBP1.66□□□□□ -2.14
KPNB1-208ENST00000580019 ATP5EP56381 51 aaPredicted RBP1.66□□□□□ -2.14
KPNB1-208ENST00000580019 Q1T7F1 81 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 KRTAP26-1Q6PEX3 210 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 C5orf17Q8NAS9 161 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 TSKUQ8WUA8 353 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 PPDPFLQ8WWR9 84 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 SNHG12Q9BXW3 62 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 Q9H521 79 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 ORMDL1Q9P0S3 153 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 AP4S1Q9Y587 144 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 PLCE1Q9P212 2302 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 SPTBP11277 2137 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 ANKRD36A6QL64 1941 aa1.66□□□□□ -2.14
KPNB1-208ENST00000580019 HEATR5BQ9P2D3 2071 aa1.65□□□□□ -2.14
KPNB1-208ENST00000580019 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 TRGV4A0A0C4DH28 118 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 SDHAF1A6NFY7 115 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 F8W1H4 67 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 UQCRHP07919 91 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 FREM3P0C091 2139 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 TPRXLQ17RH7 258 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 UNQ5815/PRO19632Q6UWF5 114 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.15
KPNB1-208ENST00000580019 V9GYS6 101 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.15
KPNB1-208ENST00000580019 TMEM262E9PQX1 116 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 H3BRM9 83 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 MPC2O95563 127 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 IGHV3-33P01772 117 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 P0C880 135 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 RNASE2P10153 161 aaKnown RBP1.64□□□□□ -2.15
KPNB1-208ENST00000580019 FAM74A1Q5RGS3 127 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 RPL7L1Q6DKI1 246 aaKnown RBP1.64□□□□□ -2.15
KPNB1-208ENST00000580019 FP248Q71RG6 208 aaPredicted RBP1.64□□□□□ -2.15
KPNB1-208ENST00000580019 SPACA4Q8TDM5 124 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 C10orf105Q8TEF2 133 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 TMEM141Q96I45 108 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 LINC00052Q96N35 136 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 NDUFA12Q9UI09 145 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 DYNC1H1Q14204 4646 aaKnown RBP1.64□□□□□ -2.15
KPNB1-208ENST00000580019 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
KPNB1-208ENST00000580019 NINQ8N4C6 2090 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 A0A096LNT2 108 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 TRBV6-8A0A0A6YYG3 113 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 A6NIN4 97 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 LINC00032P0C843 101 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 CNBPP62633 177 aaKnown RBP1.63□□□□□ -2.15
KPNB1-208ENST00000580019 RHOHQ15669 191 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 C10orf55Q5SWW7 151 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 SLC48A1Q6P1K1 146 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 LINC00299Q6ZSB3 139 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 Q8N8P6 123 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 DSCR8Q96T75 97 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 TXNDC17Q9BRA2 123 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 DPY30Q9C005 99 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 TMEM106BQ9NUM4 274 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 HUWE1Q7Z6Z7 4374 aaKnown RBP1.63□□□□□ -2.15
KPNB1-208ENST00000580019 ALMS1Q8TCU4 4167 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 MED12LQ86YW9 2145 aa1.63□□□□□ -2.15
KPNB1-208ENST00000580019 HEATR1Q9H583 2144 aaKnown RBP1.63□□□□□ -2.15
KPNB1-208ENST00000580019 UBE2L5PA0A1B0GUS4 154 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 TMEM30CPA0ZSE6 113 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 H3BQ15 152 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 SSSCA1O60232 199 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 CBLN1P23435 193 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 UBA52P62987 128 aaKnown RBP1.62□□□□□ -2.15
KPNB1-208ENST00000580019 UBE2L3P68036 154 aaKnown RBP1.62□□□□□ -2.15
KPNB1-208ENST00000580019 DCDP81605 110 aaKnown RBP1.62□□□□□ -2.15
KPNB1-208ENST00000580019 IQCJQ1A5X6 159 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 HCP5Q6MZN7 132 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 NDUFA11Q86Y39 141 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 LINC00304Q8N9R0 145 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 TTTY12Q9BZ98 90 aa1.62□□□□□ -2.15
KPNB1-208ENST00000580019 DNAH11Q96DT5 4516 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 DEFB108AA8MXU0 73 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 IGKV1-17P01599 117 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 SLC25A6P12236 298 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 IL7P13232 177 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 INSL4Q14641 139 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 S100A7L2Q5SY68 101 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 C5orf38Q86SI9 138 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 SBSPONQ8IVN8 264 aa1.61□□□□□ -2.15
KPNB1-208ENST00000580019 C9orf62Q8N4C0 152 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms