RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
SMARCD2-207ENST00000578234 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
SMARCD2-207ENST00000578234 A0A087WZ39 114 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 HERVK_113P63121 156 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 LINC00469Q8N7U9 141 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 CDKN2A-AS1Q9UH64 79 aa7.82□□□□□ -1.16
SMARCD2-207ENST00000578234 LRP2P98164 4655 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 H0Y8G0 127 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 SEC11AP67812 179 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 SYCNQ0VAF6 134 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 FAM19A3Q7Z5A8 133 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 CAMK2N2Q96S95 79 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 TOMM7Q9P0U1 55 aa7.81□□□□□ -1.16
SMARCD2-207ENST00000578234 TNXBP22105 4242 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 LEPROTL1O95214 131 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 FABP4P15090 132 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 Q6ZRP5 223 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 OR10D4PQ8NGN7 298 aa7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 PACRGQ96M98 296 aaPredicted RBP7.8□□□□□ -1.16
SMARCD2-207ENST00000578234 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 IGLC3P0DOY3 106 aa7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
SMARCD2-207ENST00000578234 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 PRSS2P07478 247 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 KIAA0087Q14695 138 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 UNQ6190/PRO20217Q6UXQ8 127 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 LINC01561Q8N1V8 128 aa7.77□□□□□ -1.17
SMARCD2-207ENST00000578234 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 SMIM1B2RUZ4 78 aa7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 NDUFA1O15239 70 aa7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
SMARCD2-207ENST00000578234 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
SMARCD2-207ENST00000578234 H3BRM9 83 aa7.75□□□□□ -1.17
SMARCD2-207ENST00000578234 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
SMARCD2-207ENST00000578234 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
SMARCD2-207ENST00000578234 MRPL35Q9NZE8 188 aaKnown RBP7.75□□□□□ -1.17
SMARCD2-207ENST00000578234 A0A1W2PNN7 141 aa7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 CKS1BP61024 79 aa7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 RPL18AQ02543 176 aaKnown RBP7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 Q8IZM0 81 aa7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
SMARCD2-207ENST00000578234 F8VRH5 84 aa7.73□□□□□ -1.17
SMARCD2-207ENST00000578234 COX7B2Q8TF08 81 aa7.73□□□□□ -1.17
SMARCD2-207ENST00000578234 F8WDY8 70 aa7.72□□□□□ -1.17
SMARCD2-207ENST00000578234 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
SMARCD2-207ENST00000578234 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
SMARCD2-207ENST00000578234 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
SMARCD2-207ENST00000578234 RNF151Q2KHN1 245 aa7.71□□□□□ -1.18
SMARCD2-207ENST00000578234 COA6Q5JTJ3 125 aaKnown RBP7.71□□□□□ -1.18
SMARCD2-207ENST00000578234 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
SMARCD2-207ENST00000578234 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
SMARCD2-207ENST00000578234 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
SMARCD2-207ENST00000578234 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
SMARCD2-207ENST00000578234 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
SMARCD2-207ENST00000578234 IGLV5-39A0A0G2JS06 123 aa7.68□□□□□ -1.18
SMARCD2-207ENST00000578234 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
SMARCD2-207ENST00000578234 CXCL5P42830 114 aa7.68□□□□□ -1.18
SMARCD2-207ENST00000578234 SYS1-DBNDD2H3BUS1 97 aa7.67□□□□□ -1.18
SMARCD2-207ENST00000578234 DPM2O94777 84 aa7.67□□□□□ -1.18
SMARCD2-207ENST00000578234 KRTDAPP60985 99 aa7.67□□□□□ -1.18
SMARCD2-207ENST00000578234 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 IGKCP01834 107 aa7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 S100A6P06703 90 aa7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 PLNP26678 52 aa7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
SMARCD2-207ENST00000578234 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
SMARCD2-207ENST00000578234 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
SMARCD2-207ENST00000578234 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 IGLV7-43P04211 117 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 S100A2P29034 98 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 PET117Q6UWS5 81 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 HIST3H2BBQ8N257 126 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
SMARCD2-207ENST00000578234 PFN2P35080 140 aa7.63□□□□□ -1.19
SMARCD2-207ENST00000578234 LINC01545Q5VT33 79 aa7.63□□□□□ -1.19
SMARCD2-207ENST00000578234 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms