RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ATP5LO75964 103 aa14□□□□□ -0.17
SMARCD2-206ENST00000577990 NDUFA6P56556 154 aa13.99□□□□□ -0.17
SMARCD2-206ENST00000577990 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
SMARCD2-206ENST00000577990 Q8IZM0 81 aa13.99□□□□□ -0.17
SMARCD2-206ENST00000577990 BAGE3Q86Y29 109 aa13.98□□□□□ -0.17
SMARCD2-206ENST00000577990 TRBV30A0A0K0K1B3 111 aa13.97□□□□□ -0.17
SMARCD2-206ENST00000577990 TLX1NBP0CAT3 122 aa13.97□□□□□ -0.17
SMARCD2-206ENST00000577990 SMIM1B2RUZ4 78 aa13.96□□□□□ -0.17
SMARCD2-206ENST00000577990 IGLC3P0DOY3 106 aa13.96□□□□□ -0.17
SMARCD2-206ENST00000577990 CKS1BP61024 79 aa13.96□□□□□ -0.17
SMARCD2-206ENST00000577990 C6orf226Q5I0X4 101 aa13.96□□□□□ -0.17
SMARCD2-206ENST00000577990 C7orf33Q8WU49 177 aa13.96□□□□□ -0.17
SMARCD2-206ENST00000577990 HSBP1O75506 76 aa13.94□□□□□ -0.18
SMARCD2-206ENST00000577990 SCO1O75880 301 aa13.94□□□□□ -0.18
SMARCD2-206ENST00000577990 LRP1Q07954 4544 aaKnown RBP13.94□□□□□ -0.18
SMARCD2-206ENST00000577990 PKHD1L1Q86WI1 4243 aa13.94□□□□□ -0.18
SMARCD2-206ENST00000577990 H3BRM9 83 aa13.93□□□□□ -0.18
SMARCD2-206ENST00000577990 Q6ZRP5 223 aa13.93□□□□□ -0.18
SMARCD2-206ENST00000577990 J3QL48 77 aa13.92□□□□□ -0.18
SMARCD2-206ENST00000577990 SPINK8P0C7L1 97 aa13.92□□□□□ -0.18
SMARCD2-206ENST00000577990 A0A1W2PNN7 141 aa13.91□□□□□ -0.18
SMARCD2-206ENST00000577990 CXCL5P42830 114 aa13.91□□□□□ -0.18
SMARCD2-206ENST00000577990 COX7B2Q8TF08 81 aa13.91□□□□□ -0.18
SMARCD2-206ENST00000577990 C9orf116Q5BN46 136 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-206ENST00000577990 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
SMARCD2-206ENST00000577990 IFI27L1Q96BM0 104 aa13.9□□□□□ -0.18
SMARCD2-206ENST00000577990 NDUFC2-KCTD14E9PQ53 114 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 F8VRH5 84 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 SERF1AO75920 110 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 LINC00310P59036 64 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 GAGE2EQ4V326 116 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 GAGE2DQ9UEU5 116 aa13.89□□□□□ -0.19
SMARCD2-206ENST00000577990 FAT3Q8TDW7 4589 aa13.88□□□□□ -0.19
SMARCD2-206ENST00000577990 TRAV12-1A0A0B4J245 112 aa13.87□□□□□ -0.19
SMARCD2-206ENST00000577990 C11orf86A6NJI1 115 aa13.87□□□□□ -0.19
SMARCD2-206ENST00000577990 CHTOPQ9Y3Y2 248 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-206ENST00000577990 HNRNPA3P51991 378 aaKnown RBP13.85□□□□□ -0.19
SMARCD2-206ENST00000577990 IGLV5-39A0A0G2JS06 123 aa13.84□□□□□ -0.19
SMARCD2-206ENST00000577990 KRTAP29-1A8MX34 341 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-206ENST00000577990 PRR3P79522 188 aaKnown RBP13.83□□□□□ -0.2
SMARCD2-206ENST00000577990 TMEM170BQ5T4T1 132 aa13.83□□□□□ -0.2
SMARCD2-206ENST00000577990 FAM168BA1KXE4 195 aa13.82□□□□□ -0.2
SMARCD2-206ENST00000577990 NUPR1O60356 82 aa13.82□□□□□ -0.2
SMARCD2-206ENST00000577990 LEPROTL1O95214 131 aa13.82□□□□□ -0.2
SMARCD2-206ENST00000577990 C9orf129Q5T035 196 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-206ENST00000577990 PHF5AQ7RTV0 110 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-206ENST00000577990 FAM19A5Q7Z5A7 132 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BKO60814 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BJP06899 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BOP23527 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BBP33778 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BDP58876 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BCP62807 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST2H2BEQ16778 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BHQ93079 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BNQ99877 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HIST1H2BMQ99879 126 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 HSPB8Q9UJY1 196 aa13.78□□□□□ -0.2
SMARCD2-206ENST00000577990 H0Y8G0 127 aa13.76□□□□□ -0.21
SMARCD2-206ENST00000577990 KRTAP7-1Q8IUC3 87 aa13.76□□□□□ -0.21
SMARCD2-206ENST00000577990 XAGE1AQ9HD64 81 aa13.76□□□□□ -0.21
SMARCD2-206ENST00000577990 TMEM223A0PJW6 202 aa13.75□□□□□ -0.21
SMARCD2-206ENST00000577990 FABP4P15090 132 aa13.75□□□□□ -0.21
SMARCD2-206ENST00000577990 ODF1Q14990 250 aa13.75□□□□□ -0.21
SMARCD2-206ENST00000577990 M0QXV9 152 aa13.74□□□□□ -0.21
SMARCD2-206ENST00000577990 SFTA2Q6UW10 78 aa13.72□□□□□ -0.21
SMARCD2-206ENST00000577990 PSORS1C2Q9UIG4 136 aa13.72□□□□□ -0.21
SMARCD2-206ENST00000577990 OXTP01178 125 aa13.71□□□□□ -0.21
SMARCD2-206ENST00000577990 SERTAD4-AS1Q5TG53 156 aa13.71□□□□□ -0.21
SMARCD2-206ENST00000577990 S100A1P23297 94 aa13.69□□□□□ -0.22
SMARCD2-206ENST00000577990 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
SMARCD2-206ENST00000577990 PLNP26678 52 aa13.68□□□□□ -0.22
SMARCD2-206ENST00000577990 PFN2P35080 140 aa13.68□□□□□ -0.22
SMARCD2-206ENST00000577990 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
SMARCD2-206ENST00000577990 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
SMARCD2-206ENST00000577990 UBE2BP63146 152 aa13.67□□□□□ -0.22
SMARCD2-206ENST00000577990 C1orf137Q5JT78 98 aa13.67□□□□□ -0.22
SMARCD2-206ENST00000577990 KRTAP11-1Q8IUC1 163 aa13.67□□□□□ -0.22
SMARCD2-206ENST00000577990 C22orf24Q9Y442 160 aa13.67□□□□□ -0.22
SMARCD2-206ENST00000577990 HMCN2Q8NDA2 5059 aa13.66□□□□□ -0.22
SMARCD2-206ENST00000577990 ATP6V1G1O75348 118 aa13.65□□□□□ -0.22
SMARCD2-206ENST00000577990 DPM2O94777 84 aa13.65□□□□□ -0.22
SMARCD2-206ENST00000577990 COX17Q14061 63 aa13.65□□□□□ -0.22
SMARCD2-206ENST00000577990 SPINK6Q6UWN8 80 aa13.65□□□□□ -0.22
SMARCD2-206ENST00000577990 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMARCD2-206ENST00000577990 PMCHL2Q9BQD1 86 aa13.64□□□□□ -0.23
SMARCD2-206ENST00000577990 TP73-AS1Q9UF72 201 aa13.64□□□□□ -0.23
SMARCD2-206ENST00000577990 PLA2G2DQ9UNK4 145 aa13.64□□□□□ -0.23
SMARCD2-206ENST00000577990 LBHQ53QV2 105 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-206ENST00000577990 COA6Q5JTJ3 125 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-206ENST00000577990 IGKCP01834 107 aa13.62□□□□□ -0.23
SMARCD2-206ENST00000577990 MRPL55Q7Z7F7 128 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-206ENST00000577990 SND1-IT1Q9HBX3 110 aa13.61□□□□□ -0.23
SMARCD2-206ENST00000577990 IGLV5-37A0A075B6J1 123 aa13.59□□□□□ -0.23
SMARCD2-206ENST00000577990 SYS1-DBNDD2H3BUS1 97 aa13.59□□□□□ -0.23
SMARCD2-206ENST00000577990 LEPROTO15243 131 aa13.59□□□□□ -0.23
SMARCD2-206ENST00000577990 IGLV7-43P04211 117 aa13.59□□□□□ -0.23
SMARCD2-206ENST00000577990 HERVK_113P61574 105 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms