RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
PCDHGB3-201ENST00000576222 M0R378 163 aa9.32□□□□□ -0.92
PCDHGB3-201ENST00000576222 Q9UF83 564 aa9.32□□□□□ -0.92
PCDHGB3-201ENST00000576222 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
PCDHGB3-201ENST00000576222 ZNF843Q8N446 348 aa9.31□□□□□ -0.92
PCDHGB3-201ENST00000576222 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
PCDHGB3-201ENST00000576222 TRBV10-3A0A0K0K1G6 114 aa9.31□□□□□ -0.92
PCDHGB3-201ENST00000576222 Q6ZVQ6 151 aa9.31□□□□□ -0.92
PCDHGB3-201ENST00000576222 PCSK5Q92824 1860 aa9.3□□□□□ -0.92
PCDHGB3-201ENST00000576222 PRR4Q16378 134 aa9.3□□□□□ -0.92
PCDHGB3-201ENST00000576222 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
PCDHGB3-201ENST00000576222 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
PCDHGB3-201ENST00000576222 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
PCDHGB3-201ENST00000576222 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
PCDHGB3-201ENST00000576222 IGKV2-28A0A075B6P5 120 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 IGKV2D-28P01615 120 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 FHL2Q14192 279 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 H0Y9J4 135 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 LINC00575Q6W349 94 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
PCDHGB3-201ENST00000576222 LELP1Q5T871 98 aa9.27□□□□□ -0.92
PCDHGB3-201ENST00000576222 FAM30AQ9NZY2 134 aa9.27□□□□□ -0.92
PCDHGB3-201ENST00000576222 MUC4Q99102 2169 aa9.27□□□□□ -0.93
PCDHGB3-201ENST00000576222 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
PCDHGB3-201ENST00000576222 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
PCDHGB3-201ENST00000576222 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
PCDHGB3-201ENST00000576222 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
PCDHGB3-201ENST00000576222 PRYO14603 147 aa9.26□□□□□ -0.93
PCDHGB3-201ENST00000576222 TMEM254Q8TBM7 123 aa9.26□□□□□ -0.93
PCDHGB3-201ENST00000576222 A8MTW9 85 aa9.26□□□□□ -0.93
PCDHGB3-201ENST00000576222 WFDC10BQ8IUB3 73 aa9.26□□□□□ -0.93
PCDHGB3-201ENST00000576222 LRCOL1A6NCL2 159 aa9.25□□□□□ -0.93
PCDHGB3-201ENST00000576222 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
PCDHGB3-201ENST00000576222 UBE2AP49459 152 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 A0A1B0GUV1 79 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 WFDC13Q8IUB5 93 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
PCDHGB3-201ENST00000576222 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
PCDHGB3-201ENST00000576222 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
PCDHGB3-201ENST00000576222 COL27A1Q8IZC6 1860 aaPredicted RBP9.22□□□□□ -0.93
PCDHGB3-201ENST00000576222 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
PCDHGB3-201ENST00000576222 CXCL6P80162 114 aa9.22□□□□□ -0.93
PCDHGB3-201ENST00000576222 HTTP42858 3142 aa9.21□□□□□ -0.93
PCDHGB3-201ENST00000576222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.21□□□□□ -0.94
PCDHGB3-201ENST00000576222 BCE1O60756 84 aa9.2□□□□□ -0.94
PCDHGB3-201ENST00000576222 LINC01561Q8N1V8 128 aa9.2□□□□□ -0.94
PCDHGB3-201ENST00000576222 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
PCDHGB3-201ENST00000576222 A0A096LNI7 61 aa9.19□□□□□ -0.94
PCDHGB3-201ENST00000576222 EGFEM1PQ0D2K5 195 aa9.19□□□□□ -0.94
PCDHGB3-201ENST00000576222 PLA2G2AP14555 144 aa9.19□□□□□ -0.94
PCDHGB3-201ENST00000576222 MTORP42345 2549 aa9.19□□□□□ -0.94
PCDHGB3-201ENST00000576222 IGLV1-51P01701 117 aa9.19□□□□□ -0.94
PCDHGB3-201ENST00000576222 JMJD1CQ15652 2540 aa9.18□□□□□ -0.94
PCDHGB3-201ENST00000576222 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
PCDHGB3-201ENST00000576222 SPTBN4Q9H254 2564 aa9.18□□□□□ -0.94
PCDHGB3-201ENST00000576222 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
PCDHGB3-201ENST00000576222 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
PCDHGB3-201ENST00000576222 ESRGQ1W209 222 aa9.17□□□□□ -0.94
PCDHGB3-201ENST00000576222 ZFYVE26Q68DK2 2539 aa9.17□□□□□ -0.94
PCDHGB3-201ENST00000576222 A6NED7 52 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 LAMA2P24043 3122 aaKnown RBP9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 ZNF575Q86XF7 245 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 Q8N9L7 120 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 C11orf45Q8TAV5 145 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 POLQO75417 2590 aa9.16□□□□□ -0.94
PCDHGB3-201ENST00000576222 DEFB131BA0A096LNP1 70 aa9.15□□□□□ -0.94
PCDHGB3-201ENST00000576222 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
PCDHGB3-201ENST00000576222 DOPEY1Q5JWR5 2465 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 PSPHP1O15172 72 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 NANOS2P60321 138 aaKnown RBP9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 PMAIP1Q13794 54 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 Q6ZQT0 140 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 CHD9Q3L8U1 2897 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
PCDHGB3-201ENST00000576222 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
PCDHGB3-201ENST00000576222 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
PCDHGB3-201ENST00000576222 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
PCDHGB3-201ENST00000576222 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
PCDHGB3-201ENST00000576222 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
PCDHGB3-201ENST00000576222 LINC01600Q96MT4 127 aa9.07□□□□□ -0.96
PCDHGB3-201ENST00000576222 MKI67P46013 3256 aaKnown RBP9.07□□□□□ -0.96
PCDHGB3-201ENST00000576222 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
PCDHGB3-201ENST00000576222 BRCA2P51587 3418 aa9.05□□□□□ -0.96
PCDHGB3-201ENST00000576222 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
PCDHGB3-201ENST00000576222 KRTAP10-9P60411 292 aa9.05□□□□□ -0.96
PCDHGB3-201ENST00000576222 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
PCDHGB3-201ENST00000576222 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
PCDHGB3-201ENST00000576222 Q6ZRU5 148 aa9.04□□□□□ -0.96
PCDHGB3-201ENST00000576222 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
PCDHGB3-201ENST00000576222 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
PCDHGB3-201ENST00000576222 LY6G6DO95868 133 aa9.02□□□□□ -0.97
PCDHGB3-201ENST00000576222 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms