RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 HERC1Q15751 4861 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 IGKV2D-26A0A0A0MRZ7 120 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 FAM19A3Q7Z5A8 133 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
ABR-231ENST00000574875 UBE2D1P51668 147 aa12.65□□□□□ -0.38
ABR-231ENST00000574875 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
ABR-231ENST00000574875 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
ABR-231ENST00000574875 HIGD1BQ9P298 99 aa12.64□□□□□ -0.39
ABR-231ENST00000574875 TMEM223A0PJW6 202 aa12.63□□□□□ -0.39
ABR-231ENST00000574875 HERVK_113P63121 156 aa12.62□□□□□ -0.39
ABR-231ENST00000574875 RNASE13Q5GAN3 156 aaKnown RBP12.62□□□□□ -0.39
ABR-231ENST00000574875 C2orf91Q6ZV80 131 aa12.62□□□□□ -0.39
ABR-231ENST00000574875 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
ABR-231ENST00000574875 GEMIN7Q9H840 131 aaKnown RBP12.62□□□□□ -0.39
ABR-231ENST00000574875 H3BRM9 83 aa12.61□□□□□ -0.39
ABR-231ENST00000574875 LEPROTO15243 131 aa12.61□□□□□ -0.39
ABR-231ENST00000574875 SCXQ7RTU7 201 aa12.61□□□□□ -0.39
ABR-231ENST00000574875 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
ABR-231ENST00000574875 VPS13BQ7Z7G8 4022 aa12.6□□□□□ -0.39
ABR-231ENST00000574875 IGLV5-45A0A087WSX0 123 aa12.6□□□□□ -0.39
ABR-231ENST00000574875 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
ABR-231ENST00000574875 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
ABR-231ENST00000574875 IGKV3OR2-268A0A0C4DH90 116 aa12.59□□□□□ -0.39
ABR-231ENST00000574875 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
ABR-231ENST00000574875 PLA2G1BP04054 148 aaKnown RBP12.58□□□□□ -0.4
ABR-231ENST00000574875 LINC00469Q8N7U9 141 aa12.58□□□□□ -0.4
ABR-231ENST00000574875 CIRBP-AS1Q8TBR5 109 aa12.58□□□□□ -0.4
ABR-231ENST00000574875 TP73-AS1Q9UF72 201 aa12.58□□□□□ -0.4
ABR-231ENST00000574875 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
ABR-231ENST00000574875 J3QQQ9 107 aa12.57□□□□□ -0.4
ABR-231ENST00000574875 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
ABR-231ENST00000574875 HSD52Q0P140 79 aa12.57□□□□□ -0.4
ABR-231ENST00000574875 LINC00242Q5T6M2 205 aa12.57□□□□□ -0.4
ABR-231ENST00000574875 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
ABR-231ENST00000574875 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
ABR-231ENST00000574875 CCL25O15444 150 aa12.56□□□□□ -0.4
ABR-231ENST00000574875 IGHV1-58A0A0C4DH39 117 aa12.55□□□□□ -0.4
ABR-231ENST00000574875 TAL2Q16559 108 aa12.55□□□□□ -0.4
ABR-231ENST00000574875 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
ABR-231ENST00000574875 TRAV13-1A0A0B4J241 112 aa12.54□□□□□ -0.4
ABR-231ENST00000574875 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
ABR-231ENST00000574875 CNBPP62633 177 aaKnown RBP12.54□□□□□ -0.4
ABR-231ENST00000574875 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
ABR-231ENST00000574875 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
ABR-231ENST00000574875 CHCHD10Q8WYQ3 142 aaPredicted RBP12.54□□□□□ -0.4
ABR-231ENST00000574875 BATFQ16520 125 aa12.53□□□□□ -0.4
ABR-231ENST00000574875 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
ABR-231ENST00000574875 CDKN2A-AS1Q9UH64 79 aa12.53□□□□□ -0.4
ABR-231ENST00000574875 SLPIP03973 132 aa12.52□□□□□ -0.41
ABR-231ENST00000574875 BVES-AS1Q5T3Y7 98 aa12.52□□□□□ -0.41
ABR-231ENST00000574875 FLG2Q5D862 2391 aaPredicted RBP12.52□□□□□ -0.41
ABR-231ENST00000574875 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.51□□□□□ -0.41
ABR-231ENST00000574875 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
ABR-231ENST00000574875 COX6A2Q02221 97 aa12.5□□□□□ -0.41
ABR-231ENST00000574875 SCGB1D4Q6XE38 83 aa12.5□□□□□ -0.41
ABR-231ENST00000574875 C15orf56Q8N910 161 aa12.5□□□□□ -0.41
ABR-231ENST00000574875 IGLV5-39A0A0G2JS06 123 aa12.49□□□□□ -0.41
ABR-231ENST00000574875 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
ABR-231ENST00000574875 SPINK8P0C7L1 97 aa12.49□□□□□ -0.41
ABR-231ENST00000574875 SS18Q15532 418 aa12.49□□□□□ -0.41
ABR-231ENST00000574875 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
ABR-231ENST00000574875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
ABR-231ENST00000574875 IGHV3-64A0A075B6Q5 118 aa12.48□□□□□ -0.41
ABR-231ENST00000574875 XCL1P47992 114 aa12.47□□□□□ -0.41
ABR-231ENST00000574875 FOXI1Q12951 378 aa12.47□□□□□ -0.41
ABR-231ENST00000574875 A6NDN8 102 aa12.46□□□□□ -0.41
ABR-231ENST00000574875 PANO1I0J062 215 aa12.46□□□□□ -0.41
ABR-231ENST00000574875 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.41
ABR-231ENST00000574875 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
ABR-231ENST00000574875 DPH3Q96FX2 82 aa12.46□□□□□ -0.41
ABR-231ENST00000574875 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.41
ABR-231ENST00000574875 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
ABR-231ENST00000574875 CEND1Q8N111 149 aa12.45□□□□□ -0.42
ABR-231ENST00000574875 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
ABR-231ENST00000574875 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
ABR-231ENST00000574875 IGHV3OR16-9A0A0B4J2B5 98 aa12.44□□□□□ -0.42
ABR-231ENST00000574875 A0A087WZ39 114 aa12.43□□□□□ -0.42
ABR-231ENST00000574875 GVQW2A0A096LPI5 108 aaPredicted RBP12.43□□□□□ -0.42
ABR-231ENST00000574875 NDUFA1O15239 70 aa12.43□□□□□ -0.42
ABR-231ENST00000574875 KRTAP10-4P60372 401 aaPredicted RBP12.43□□□□□ -0.42
ABR-231ENST00000574875 DMBT1Q9UGM3 2413 aaPredicted RBP12.43□□□□□ -0.42
ABR-231ENST00000574875 TMEM238C9JI98 176 aa12.42□□□□□ -0.42
ABR-231ENST00000574875 CIRBPQ14011 172 aaKnown RBP12.42□□□□□ -0.42
ABR-231ENST00000574875 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
ABR-231ENST00000574875 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABR-231ENST00000574875 MYCBP2O75592 4640 aa12.4□□□□□ -0.42
ABR-231ENST00000574875 A0A0J9YXY3 114 aa12.4□□□□□ -0.42
ABR-231ENST00000574875 TIMM17BO60830 172 aa12.4□□□□□ -0.42
ABR-231ENST00000574875 CHTF8P0CG12 524 aa12.4□□□□□ -0.42
ABR-231ENST00000574875 PTTG1IPP53801 180 aa12.4□□□□□ -0.42
ABR-231ENST00000574875 RPL37AP61513 92 aaKnown RBP12.4□□□□□ -0.42
ABR-231ENST00000574875 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 A6NJY4 79 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 J3QL48 77 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 HERV-K104P63124 156 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 Q6ZVH6 145 aa12.39□□□□□ -0.43
ABR-231ENST00000574875 A0A087WYN8 130 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms