RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
NPLOC4-216ENST00000574344 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 TMEM223A0PJW6 202 aa6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 J3QQQ9 107 aa6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 ZNF22P17026 224 aaPredicted RBP6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 Q6ZUT4 128 aa6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 CEND1Q8N111 149 aa6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-216ENST00000574344 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 A0A0J9YXV3 536 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 HERVK_113P63121 156 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 VAMP3Q15836 100 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 TTTY13Q9BZ97 58 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
NPLOC4-216ENST00000574344 VPS13BQ7Z7G8 4022 aa6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 SMIM13P0DJ93 91 aa6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 LINC01620Q4KN68 170 aa6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
NPLOC4-216ENST00000574344 FAT1Q14517 4588 aa6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 UBE2D1P51668 147 aa6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 GAGE6Q13070 117 aa6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 SPANXB1Q9NS25 103 aaPredicted RBP6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
NPLOC4-216ENST00000574344 IGHV1-58A0A0C4DH39 117 aa6.34□□□□□ -1.39
NPLOC4-216ENST00000574344 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-216ENST00000574344 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
NPLOC4-216ENST00000574344 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 IGHV3-64A0A075B6Q5 118 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 C9orf118A6NHY6 69 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 FABP2P12104 132 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 FXYD2P54710 66 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 MIAQ16674 131 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 Q6ZSA8 131 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 NTM-AS1Q6ZSK4 140 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-216ENST00000574344 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 TSPEAR-AS2P59090 65 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 RBX1P62877 108 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 LINC00269Q8N2A0 174 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 RAB37Q96AX2 223 aa6.32□□□□□ -1.4
NPLOC4-216ENST00000574344 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 TRAV13-1A0A0B4J241 112 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 H3BUT2 72 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
NPLOC4-216ENST00000574344 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
NPLOC4-216ENST00000574344 REG3AQ06141 175 aa6.3□□□□□ -1.4
NPLOC4-216ENST00000574344 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
NPLOC4-216ENST00000574344 Q6ZVH6 145 aa6.3□□□□□ -1.4
NPLOC4-216ENST00000574344 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 A0A1W2PPM0 123 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 K7EP34 96 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 K7ERJ3 54 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 NDUFA1O15239 70 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 SFTA2Q6UW10 78 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
NPLOC4-216ENST00000574344 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 J3QL48 77 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 CCL25O15444 150 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 TIMM17BO60830 172 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 HERV-K104P63124 156 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
NPLOC4-216ENST00000574344 IGLV4-60A0A075B6I1 120 aa6.27□□□□□ -1.41
NPLOC4-216ENST00000574344 TRAV8-4A0A0B4J246 113 aa6.27□□□□□ -1.41
NPLOC4-216ENST00000574344 IGKV3OR2-268A0A0C4DH90 116 aa6.27□□□□□ -1.41
NPLOC4-216ENST00000574344 SS18Q15532 418 aa6.27□□□□□ -1.41
NPLOC4-216ENST00000574344 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
NPLOC4-216ENST00000574344 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
NPLOC4-216ENST00000574344 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
NPLOC4-216ENST00000574344 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
NPLOC4-216ENST00000574344 IFITM1P13164 125 aa6.26□□□□□ -1.41
NPLOC4-216ENST00000574344 HERC1Q15751 4861 aa6.25□□□□□ -1.41
NPLOC4-216ENST00000574344 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
NPLOC4-216ENST00000574344 APOMO95445 188 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms