RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 CKS1BP61024 79 aa7.03□□□□□ -1.28
PRPF8-208ENST00000573716 MRPL51Q4U2R6 128 aaKnown RBP7.03□□□□□ -1.28
PRPF8-208ENST00000573716 GAGE10A6NGK3 116 aa7.02□□□□□ -1.29
PRPF8-208ENST00000573716 TCAPO15273 167 aa7.02□□□□□ -1.29
PRPF8-208ENST00000573716 UQCC3Q6UW78 93 aa7.02□□□□□ -1.29
PRPF8-208ENST00000573716 CKS2P33552 79 aa7.01□□□□□ -1.29
PRPF8-208ENST00000573716 LINC00337Q8N6G1 96 aa7.01□□□□□ -1.29
PRPF8-208ENST00000573716 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
PRPF8-208ENST00000573716 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 IFI27P40305 119 aaPredicted RBP7□□□□□ -1.29
PRPF8-208ENST00000573716 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 XP32Q5T750 250 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 LINC00167Q96N53 147 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
PRPF8-208ENST00000573716 TMEM250H0YL14 139 aa6.99□□□□□ -1.29
PRPF8-208ENST00000573716 TNFRSF6BO95407 300 aa6.99□□□□□ -1.29
PRPF8-208ENST00000573716 SMIM7Q9BQ49 75 aa6.99□□□□□ -1.29
PRPF8-208ENST00000573716 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
PRPF8-208ENST00000573716 LINC01551Q86U37 167 aa6.98□□□□□ -1.29
PRPF8-208ENST00000573716 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
PRPF8-208ENST00000573716 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
PRPF8-208ENST00000573716 OSTCQ9NRP0 149 aa6.98□□□□□ -1.29
PRPF8-208ENST00000573716 IGLV4-3A0A075B6K6 122 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 TRBV24-1A0A075B6N3 115 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 SCO1O75880 301 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 AKR1D1P51857 326 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 Q6ZN92 141 aa6.97□□□□□ -1.29
PRPF8-208ENST00000573716 D6R8Y8 96 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 NPYP01303 97 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 RAB5AP20339 215 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 TEX43Q6ZNM6 134 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 SVBPQ8N300 66 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 V9GYV3 84 aa6.96□□□□□ -1.3
PRPF8-208ENST00000573716 RAB5BP61020 215 aa6.95□□□□□ -1.3
PRPF8-208ENST00000573716 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
PRPF8-208ENST00000573716 Q8IZM0 81 aa6.95□□□□□ -1.3
PRPF8-208ENST00000573716 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
PRPF8-208ENST00000573716 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
PRPF8-208ENST00000573716 EIF5A2Q9GZV4 153 aaKnown RBP6.95□□□□□ -1.3
PRPF8-208ENST00000573716 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 F8VRH5 84 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 PRLHP81277 87 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 PNRC1Q12796 327 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-208ENST00000573716 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 PYGO1Q9Y3Y4 419 aa6.94□□□□□ -1.3
PRPF8-208ENST00000573716 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
PRPF8-208ENST00000573716 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
PRPF8-208ENST00000573716 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
PRPF8-208ENST00000573716 TMEM218A2RU14 115 aa6.92□□□□□ -1.3
PRPF8-208ENST00000573716 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
PRPF8-208ENST00000573716 FAM74A3Q4VXF1 159 aa6.92□□□□□ -1.3
PRPF8-208ENST00000573716 FP248Q71RG6 208 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-208ENST00000573716 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
PRPF8-208ENST00000573716 FAM19A1Q7Z5A9 133 aa6.91□□□□□ -1.3
PRPF8-208ENST00000573716 VCX2Q9H322 139 aa6.91□□□□□ -1.3
PRPF8-208ENST00000573716 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.3
PRPF8-208ENST00000573716 A0A1B0GW15 77 aa6.9□□□□□ -1.3
PRPF8-208ENST00000573716 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
PRPF8-208ENST00000573716 C5orf52A6NGY3 159 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 APOC3P02656 99 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 ADIRFQ15847 76 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 C10orf91Q5T1B1 145 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
PRPF8-208ENST00000573716 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
PRPF8-208ENST00000573716 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 PPBPP02775 128 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 CXCL5P42830 114 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 ALKAL2Q6UX46 152 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 C2orf66Q6UXQ4 117 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 ORMDL3Q8N138 153 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
PRPF8-208ENST00000573716 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
PRPF8-208ENST00000573716 HERVK_113P63121 156 aa6.87□□□□□ -1.31
PRPF8-208ENST00000573716 TMEM136Q6ZRR5 245 aa6.87□□□□□ -1.31
PRPF8-208ENST00000573716 AMELXQ99217 191 aa6.87□□□□□ -1.31
PRPF8-208ENST00000573716 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
PRPF8-208ENST00000573716 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
PRPF8-208ENST00000573716 CBLN2Q8IUK8 224 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 DAND5Q8N907 189 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 HIGD2AQ9BW72 106 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 TMEM126AQ9H061 195 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
PRPF8-208ENST00000573716 MT-ND4LP03901 98 aa6.85□□□□□ -1.31
PRPF8-208ENST00000573716 SEC11AP67812 179 aa6.85□□□□□ -1.31
PRPF8-208ENST00000573716 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 374 ms