RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 SMIM29Q86T20 159 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 TRBV24-1A0A075B6N3 115 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 TRBV30A0A0K0K1B3 111 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 NDUFC2-KCTD14E9PQ53 114 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 TMEM250H0YL14 139 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 NUPR1O60356 82 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 RPL39P62891 51 aaKnown RBP4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 BORCS7Q96B45 105 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
NPLOC4-211ENST00000573212 LINC00862A6NCI5 91 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 PPP1R2P9O14990 202 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 MRPL51Q4U2R6 128 aaKnown RBP4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 C20orf78Q9BR46 151 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 OSTCQ9NRP0 149 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
NPLOC4-211ENST00000573212 CRYGAP11844 174 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 TPRXLQ17RH7 258 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 LINC00242Q5T6M2 205 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 FAM104BQ5XKR9 115 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 LINC01561Q8N1V8 128 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 TYMSOSQ8TAI1 123 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 SPANXA1Q9NS26 97 aa4.7□□□□□ -1.66
NPLOC4-211ENST00000573212 ZNF727A8MUV8 499 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 TCAPO15273 167 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 KRTAP13-2Q52LG2 175 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 C2orf82Q6UX34 121 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 LINC01551Q86U37 167 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 V9GYV3 84 aa4.69□□□□□ -1.66
NPLOC4-211ENST00000573212 LINC01547P58512 204 aaPredicted RBP4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 HBBP68871 147 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 CTAG1AP78358 180 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 SLC51BQ86UW2 128 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 PACRGQ96M98 296 aaPredicted RBP4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 RETNLBQ9BQ08 111 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 ANAPC11Q9NYG5 84 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 PYGO1Q9Y3Y4 419 aa4.68□□□□□ -1.66
NPLOC4-211ENST00000573212 TGIF2-C20orf24A0A0A6YYL0 155 aa4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 BCE1O60756 84 aa4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 TP73-AS1Q9UF72 201 aa4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
NPLOC4-211ENST00000573212 IGLV7-46A0A075B6I9 117 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 IGLV4-3A0A075B6K6 122 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 CKS2P33552 79 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 FAM74A3Q4VXF1 159 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 KRTAP13-1Q8IUC0 172 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 SMIM2Q9BVW6 85 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 NAT8BQ9UHF3 227 aa4.66□□□□□ -1.66
NPLOC4-211ENST00000573212 SMIM27A0A1W2PRY6 76 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 FAM19A3Q7Z5A8 133 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 LINC00167Q96N53 147 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 SMIM7Q9BQ49 75 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 XAGE1AQ9HD64 81 aa4.65□□□□□ -1.67
NPLOC4-211ENST00000573212 NPYP01303 97 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 SRP19P09132 144 aaKnown RBP4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 IFI27P40305 119 aaPredicted RBP4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 CEBPGP53567 150 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 Q6ZN92 141 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 LINC00304Q8N9R0 145 aa4.64□□□□□ -1.67
NPLOC4-211ENST00000573212 A0A1B0GW15 77 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 D6R8Y8 96 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 Q8IZM0 81 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 TCTE3Q8IZS6 198 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 AMELXQ99217 191 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 EIF5A2Q9GZV4 153 aaKnown RBP4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
NPLOC4-211ENST00000573212 A0A1B0GXF2 115 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 PPBPP02775 128 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 CKS1BP61024 79 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 ZC2HC1BQ5TFG8 222 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
NPLOC4-211ENST00000573212 RPL37AP8A6NKH3 93 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 RAB5AP20339 215 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 SEC61GP60059 68 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 ADAMTSL4-AS1Q5T5F5 129 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 TEX43Q6ZNM6 134 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 TOMM7Q9P0U1 55 aa4.61□□□□□ -1.67
NPLOC4-211ENST00000573212 IGKV2D-26A0A0A0MRZ7 120 aa4.6□□□□□ -1.67
NPLOC4-211ENST00000573212 F8VRH5 84 aa4.6□□□□□ -1.67
NPLOC4-211ENST00000573212 ALKAL2Q6UX46 152 aa4.6□□□□□ -1.67
NPLOC4-211ENST00000573212 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
NPLOC4-211ENST00000573212 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
NPLOC4-211ENST00000573212 F8W036 122 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms