RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 LINC00482Q8N8I6 264 aa11.62□□□□□ -0.55
LITAF-209ENST00000571688 SPG11Q96JI7 2443 aa11.62□□□□□ -0.55
LITAF-209ENST00000571688 NBPF19A0A087WUL8 3843 aa11.61□□□□□ -0.55
LITAF-209ENST00000571688 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
LITAF-209ENST00000571688 FSHBP01225 129 aa11.61□□□□□ -0.55
LITAF-209ENST00000571688 GIG44P09565 113 aaPredicted RBP11.6□□□□□ -0.55
LITAF-209ENST00000571688 RNASE1P07998 156 aaKnown RBP11.6□□□□□ -0.55
LITAF-209ENST00000571688 DSCR9P59020 149 aa11.6□□□□□ -0.55
LITAF-209ENST00000571688 LINC01547P58512 204 aaPredicted RBP11.59□□□□□ -0.55
LITAF-209ENST00000571688 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
LITAF-209ENST00000571688 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
LITAF-209ENST00000571688 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
LITAF-209ENST00000571688 AKAP9Q99996 3911 aa11.59□□□□□ -0.55
LITAF-209ENST00000571688 LINC00575Q6W349 94 aa11.58□□□□□ -0.55
LITAF-209ENST00000571688 ZNF561-AS1K7EIQ3 104 aa11.58□□□□□ -0.56
LITAF-209ENST00000571688 M0R2N4 97 aa11.57□□□□□ -0.56
LITAF-209ENST00000571688 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
LITAF-209ENST00000571688 TRAV10A0A0B4J240 114 aa11.57□□□□□ -0.56
LITAF-209ENST00000571688 PRO0628Q9UI54 55 aa11.57□□□□□ -0.56
LITAF-209ENST00000571688 COX17Q14061 63 aa11.56□□□□□ -0.56
LITAF-209ENST00000571688 LINC00336Q6ZUF6 198 aa11.56□□□□□ -0.56
LITAF-209ENST00000571688 Q6ZVQ6 151 aa11.56□□□□□ -0.56
LITAF-209ENST00000571688 MXRA5Q9NR99 2828 aa11.56□□□□□ -0.56
LITAF-209ENST00000571688 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
LITAF-209ENST00000571688 KIAA0087Q14695 138 aa11.55□□□□□ -0.56
LITAF-209ENST00000571688 Q8NDZ9 215 aa11.55□□□□□ -0.56
LITAF-209ENST00000571688 RMI2Q96E14 147 aa11.55□□□□□ -0.56
LITAF-209ENST00000571688 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
LITAF-209ENST00000571688 SNURFQ9Y675 71 aa11.55□□□□□ -0.56
LITAF-209ENST00000571688 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
LITAF-209ENST00000571688 HAMPP81172 84 aa11.54□□□□□ -0.56
LITAF-209ENST00000571688 ZANQ9Y493 2812 aa11.54□□□□□ -0.56
LITAF-209ENST00000571688 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
LITAF-209ENST00000571688 CXCL6P80162 114 aa11.53□□□□□ -0.56
LITAF-209ENST00000571688 FP248Q71RG6 208 aaPredicted RBP11.53□□□□□ -0.56
LITAF-209ENST00000571688 SMIM26A0A096LP01 95 aa11.53□□□□□ -0.56
LITAF-209ENST00000571688 F8WEM9 126 aa11.53□□□□□ -0.56
LITAF-209ENST00000571688 LAMTOR3Q9UHA4 124 aa11.53□□□□□ -0.56
LITAF-209ENST00000571688 CR1P17927 2039 aa11.52□□□□□ -0.57
LITAF-209ENST00000571688 IGHV4-28A0A0C4DH34 117 aa11.51□□□□□ -0.57
LITAF-209ENST00000571688 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
LITAF-209ENST00000571688 CLPSL2Q6UWE3 100 aa11.51□□□□□ -0.57
LITAF-209ENST00000571688 CSNK1G2-AS1Q8NCQ2 148 aa11.51□□□□□ -0.57
LITAF-209ENST00000571688 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
LITAF-209ENST00000571688 CHD6Q8TD26 2715 aa11.49□□□□□ -0.57
LITAF-209ENST00000571688 PDE6GP18545 87 aa11.49□□□□□ -0.57
LITAF-209ENST00000571688 ZNF843Q8N446 348 aa11.49□□□□□ -0.57
LITAF-209ENST00000571688 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
LITAF-209ENST00000571688 CUBNO60494 3623 aa11.49□□□□□ -0.57
LITAF-209ENST00000571688 NDUFC1O43677 76 aa11.48□□□□□ -0.57
LITAF-209ENST00000571688 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
LITAF-209ENST00000571688 Q8N3U1 123 aa11.48□□□□□ -0.57
LITAF-209ENST00000571688 WNK1Q9H4A3 2382 aa11.47□□□□□ -0.57
LITAF-209ENST00000571688 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
LITAF-209ENST00000571688 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.57
LITAF-209ENST00000571688 SPATA3Q8NHX4 192 aa11.46□□□□□ -0.57
LITAF-209ENST00000571688 CMC4P56277 68 aaPredicted RBP11.46□□□□□ -0.58
LITAF-209ENST00000571688 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.58
LITAF-209ENST00000571688 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
LITAF-209ENST00000571688 Q6ZQY7 126 aa11.45□□□□□ -0.58
LITAF-209ENST00000571688 CCL24O00175 119 aa11.45□□□□□ -0.58
LITAF-209ENST00000571688 GYPEP15421 78 aa11.45□□□□□ -0.58
LITAF-209ENST00000571688 ATP5EP56381 51 aaPredicted RBP11.45□□□□□ -0.58
LITAF-209ENST00000571688 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
LITAF-209ENST00000571688 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
LITAF-209ENST00000571688 H3BQ85 93 aa11.44□□□□□ -0.58
LITAF-209ENST00000571688 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
LITAF-209ENST00000571688 USP9YO00507 2555 aaPredicted RBP11.44□□□□□ -0.58
LITAF-209ENST00000571688 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
LITAF-209ENST00000571688 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
LITAF-209ENST00000571688 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
LITAF-209ENST00000571688 CHCHD10Q8WYQ3 142 aaPredicted RBP11.42□□□□□ -0.58
LITAF-209ENST00000571688 ITPR1Q14643 2758 aa11.42□□□□□ -0.58
LITAF-209ENST00000571688 MIFP14174 115 aa11.42□□□□□ -0.58
LITAF-209ENST00000571688 DEFB130BP0DP73 79 aa11.41□□□□□ -0.58
LITAF-209ENST00000571688 DEFB130AP0DP74 79 aa11.41□□□□□ -0.58
LITAF-209ENST00000571688 LINC00474Q9P2X8 69 aa11.41□□□□□ -0.58
LITAF-209ENST00000571688 SETXQ7Z333 2677 aaKnown RBP11.41□□□□□ -0.58
LITAF-209ENST00000571688 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
LITAF-209ENST00000571688 LINC00612Q8N6U2 182 aa11.4□□□□□ -0.58
LITAF-209ENST00000571688 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
LITAF-209ENST00000571688 NREPQ16612 68 aa11.39□□□□□ -0.59
LITAF-209ENST00000571688 WFDC11Q8NEX6 87 aa11.39□□□□□ -0.59
LITAF-209ENST00000571688 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
LITAF-209ENST00000571688 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
LITAF-209ENST00000571688 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
LITAF-209ENST00000571688 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
LITAF-209ENST00000571688 LINC01006Q8NI28 216 aa11.38□□□□□ -0.59
LITAF-209ENST00000571688 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
LITAF-209ENST00000571688 A0A096LPF7 62 aa11.37□□□□□ -0.59
LITAF-209ENST00000571688 ERC2-IT1O76042 136 aa11.37□□□□□ -0.59
LITAF-209ENST00000571688 TMEM254Q8TBM7 123 aa11.37□□□□□ -0.59
LITAF-209ENST00000571688 NCOR2Q9Y618 2525 aa11.37□□□□□ -0.59
LITAF-209ENST00000571688 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
LITAF-209ENST00000571688 DOPEY1Q5JWR5 2465 aa11.36□□□□□ -0.59
LITAF-209ENST00000571688 UNQ6190/PRO20217Q6UXQ8 127 aa11.36□□□□□ -0.59
LITAF-209ENST00000571688 FBN2P35556 2912 aa11.36□□□□□ -0.59
LITAF-209ENST00000571688 REG3AQ06141 175 aa11.36□□□□□ -0.59
LITAF-209ENST00000571688 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
LITAF-209ENST00000571688 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms