RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KIR2DL4Q99706 377 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 TMEM191AQ9H0A3 160 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 TGIF2-C20orf24A0A0A6YYL0 155 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 IFITM10A6NMD0 228 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 F8W036 122 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 SNAPINO95295 136 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 UBE2AP49459 152 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
CTDNEP1-202ENST00000570380 A0A1B0GUT8 65 aa5.83□□□□□ -1.48
CTDNEP1-202ENST00000570380 HBBP68871 147 aa5.83□□□□□ -1.48
CTDNEP1-202ENST00000570380 MRPS36P82909 103 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-202ENST00000570380 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 GAGE10A6NGK3 116 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 APOC3P02656 99 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 ADCYAP1P18509 176 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 BORCS7Q96B45 105 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 SEC11CQ9BY50 192 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 SPANXA1Q9NS26 97 aa5.82□□□□□ -1.48
CTDNEP1-202ENST00000570380 RPL32P62910 135 aaKnown RBP5.81□□□□□ -1.48
CTDNEP1-202ENST00000570380 NAT8BQ9UHF3 227 aa5.81□□□□□ -1.48
CTDNEP1-202ENST00000570380 TMEM218A2RU14 115 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 PPP1R2P9O14990 202 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 PPP1R17O96001 155 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 PNRC1Q12796 327 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 RIGQ13278 110 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 XP32Q5T750 250 aa5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 MRPL54Q6P161 138 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-202ENST00000570380 CKS1BP61024 79 aa5.79□□□□□ -1.48
CTDNEP1-202ENST00000570380 PRLHP81277 87 aa5.79□□□□□ -1.48
CTDNEP1-202ENST00000570380 LINC01561Q8N1V8 128 aa5.79□□□□□ -1.48
CTDNEP1-202ENST00000570380 TOMM7Q9P0U1 55 aa5.79□□□□□ -1.48
CTDNEP1-202ENST00000570380 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 TNFRSF6BO95407 300 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 PRSS2P07478 247 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 RHEBQ15382 184 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 C6orf226Q5I0X4 101 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-202ENST00000570380 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
CTDNEP1-202ENST00000570380 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-202ENST00000570380 FAM104BQ5XKR9 115 aa5.77□□□□□ -1.49
CTDNEP1-202ENST00000570380 C20orf78Q9BR46 151 aa5.77□□□□□ -1.49
CTDNEP1-202ENST00000570380 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 TRBV24-1A0A075B6N3 115 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 TCAPO15273 167 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 MT-ND4LP03901 98 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 Q6ZN92 141 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 Q8IZM0 81 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 DAND5Q8N907 189 aa5.76□□□□□ -1.49
CTDNEP1-202ENST00000570380 IGLV4-3A0A075B6K6 122 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 IGKV2-28A0A075B6P5 120 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 M0R2T5 61 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 SCO1O75880 301 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 IGKV2D-28P01615 120 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
CTDNEP1-202ENST00000570380 A0A1B0GW15 77 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 PRSS47A8MTI9 375 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 D6R8Y8 96 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 F8VRH5 84 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 IFI27P40305 119 aaPredicted RBP5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 C10orf91Q5T1B1 145 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 ZC2HC1BQ5TFG8 222 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 ATP5L2Q7Z4Y8 100 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 Q8NBF4 154 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 RPS10P5Q9NQ39 176 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 SMCO4Q9NRQ5 59 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
CTDNEP1-202ENST00000570380 SPINK1P00995 79 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 NPYP01303 97 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 S100A8P05109 93 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 S100PP25815 95 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 CKS2P33552 79 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 TMEM141Q96I45 108 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
CTDNEP1-202ENST00000570380 IGLV8-61A0A075B6I0 122 aa5.72□□□□□ -1.49
CTDNEP1-202ENST00000570380 TMEM238C9JI98 176 aa5.72□□□□□ -1.49
CTDNEP1-202ENST00000570380 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
CTDNEP1-202ENST00000570380 TEX43Q6ZNM6 134 aa5.72□□□□□ -1.49
CTDNEP1-202ENST00000570380 CBLN2Q8IUK8 224 aa5.72□□□□□ -1.49
CTDNEP1-202ENST00000570380 USH2AO75445 5202 aa5.71□□□□□ -1.49
CTDNEP1-202ENST00000570380 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
CTDNEP1-202ENST00000570380 NDUFA12Q9UI09 145 aa5.71□□□□□ -1.5
CTDNEP1-202ENST00000570380 M0R378 163 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 TMEM136Q6ZRR5 245 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 Q8N377 158 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 PRELID3AQ96N28 172 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 GNB1LQ9BYB4 327 aa5.7□□□□□ -1.5
CTDNEP1-202ENST00000570380 ORMDL3Q8N138 153 aa5.69□□□□□ -1.5
CTDNEP1-202ENST00000570380 AMELXQ99217 191 aa5.69□□□□□ -1.5
CTDNEP1-202ENST00000570380 C2orf88Q9BSF0 95 aa5.69□□□□□ -1.5
CTDNEP1-202ENST00000570380 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
CTDNEP1-202ENST00000570380 PPBPP02775 128 aa5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 CXCL5P42830 114 aa5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 RAB5BP61020 215 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms