RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 DEFB4AO15263 64 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 TCL1BO95988 128 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 SCGB1C2P0DMR2 95 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 PSMB2P49721 201 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 LELP1Q5T871 98 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
SF3B3-213ENST00000569687 A0A096LPF7 62 aa3.69□□□□□ -1.82
SF3B3-213ENST00000569687 MEIG1Q5JSS6 88 aa3.69□□□□□ -1.82
SF3B3-213ENST00000569687 SOSTDC1Q6X4U4 206 aa3.69□□□□□ -1.82
SF3B3-213ENST00000569687 C11orf68Q9H3H3 251 aaKnown RBP3.69□□□□□ -1.82
SF3B3-213ENST00000569687 ICOSQ9Y6W8 199 aa3.69□□□□□ -1.82
SF3B3-213ENST00000569687 DNHD1Q96M86 4753 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 J3QR89 54 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 COX6CP09669 75 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 ATXN8Q156A1 80 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 ETDBQ3ZM63 59 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 LYPD5Q6UWN5 251 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 Q8IZM0 81 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 LINC00269Q8N2A0 174 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 WWC2-AS2Q96NR7 200 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
SF3B3-213ENST00000569687 KLK5Q9Y337 293 aaPredicted RBP3.68□□□□□ -1.82
SF3B3-213ENST00000569687 TRAV13-2A0A0B4J235 113 aa3.67□□□□□ -1.82
SF3B3-213ENST00000569687 COX7A2LO14548 114 aa3.67□□□□□ -1.82
SF3B3-213ENST00000569687 COX17Q14061 63 aa3.67□□□□□ -1.82
SF3B3-213ENST00000569687 C6orf226Q5I0X4 101 aa3.67□□□□□ -1.82
SF3B3-213ENST00000569687 DAND5Q8N907 189 aa3.67□□□□□ -1.82
SF3B3-213ENST00000569687 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
SF3B3-213ENST00000569687 STAB1Q9NY15 2570 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 H7C2G1 150 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 SLC25A20O43772 301 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
SF3B3-213ENST00000569687 CXCL5P42830 114 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 XCL1P47992 114 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 LINC00158P58513 81 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 REG3AQ06141 175 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 FOXI1Q12951 378 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 Q1RN00 199 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 LINC01620Q4KN68 170 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 MUC7Q8TAX7 377 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 PPDPFLQ8WWR9 84 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 COL6A5A8TX70 2615 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
SF3B3-213ENST00000569687 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 C9JAW5 83 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 LST1O00453 97 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 ANGP03950 147 aaKnown RBP3.65□□□□□ -1.83
SF3B3-213ENST00000569687 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
SF3B3-213ENST00000569687 CCL18P55774 89 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 NPC2P61916 151 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 KPRPQ5T749 579 aaPredicted RBP3.65□□□□□ -1.83
SF3B3-213ENST00000569687 ENHOQ6UWT2 76 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 CARD19Q96LW7 228 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 VPS25Q9BRG1 176 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 SND1-IT1Q9HBX3 110 aa3.65□□□□□ -1.83
SF3B3-213ENST00000569687 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 GVQW2A0A096LPI5 108 aaPredicted RBP3.64□□□□□ -1.83
SF3B3-213ENST00000569687 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 H0YGX0 51 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 H3BT86 120 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 NDUFC2O95298 119 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 TRACP01848 142 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 HTN3P15516 51 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 CKS1BP61024 79 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 KRTAP21-3Q3LHN1 58 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 DEFB121Q5J5C9 76 aa3.64□□□□□ -1.83
SF3B3-213ENST00000569687 F8WDY8 70 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 ESRGQ1W209 222 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 Q6ZTC4 211 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 MTURNQ8N3F0 131 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 Q8N3U1 123 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 LINC00337Q8N6G1 96 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 C11orf45Q8TAV5 145 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 TM2D3Q9BRN9 247 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 RETNQ9HD89 108 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 KLK12Q9UKR0 248 aa3.63□□□□□ -1.83
SF3B3-213ENST00000569687 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
SF3B3-213ENST00000569687 IGLV10-54A0A075B6I4 117 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 DEFB131BA0A096LNP1 70 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 K7EIL1 84 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
SF3B3-213ENST00000569687 VPREB1P12018 145 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 PFN2P35080 140 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 LINC01556Q5JQF7 62 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 KRTAP26-1Q6PEX3 210 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 CLPSL2Q6UWE3 100 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 C2orf82Q6UX34 121 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms