RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 CACNA1GO43497 2377 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 KNTC1P50748 2209 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
KARS-211ENST00000569298 ETDCA0A1B0GVM5 59 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 CLPSL1A2RUU4 121 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 K7EQD1 137 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 IGLV1-44P01699 117 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 C6orf99Q4VX62 202 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 MUC7Q8TAX7 377 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 CHCHD7Q9BUK0 85 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 PRRC2AP48634 2157 aaKnown RBP4.41□□□□□ -1.7
KARS-211ENST00000569298 FER1L5A0AVI2 2057 aa4.41□□□□□ -1.7
KARS-211ENST00000569298 INTS1Q8N201 2190 aaKnown RBP4.4□□□□□ -1.7
KARS-211ENST00000569298 IGHV7-81A0A0B4J1V7 117 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 A8MU10 97 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 TFF1P04155 84 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 CCL18P55774 89 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 PRR9Q5T870 116 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 LINC00575Q6W349 94 aa4.4□□□□□ -1.71
KARS-211ENST00000569298 ATRXP46100 2492 aa4.39□□□□□ -1.71
KARS-211ENST00000569298 TRGV2A0A075B6R0 118 aa4.39□□□□□ -1.71
KARS-211ENST00000569298 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
KARS-211ENST00000569298 IGHV3-73A0A0B4J1V6 119 aa4.39□□□□□ -1.71
KARS-211ENST00000569298 COX7BP24311 80 aa4.39□□□□□ -1.71
KARS-211ENST00000569298 MRPS21P82921 87 aaKnown RBP4.39□□□□□ -1.71
KARS-211ENST00000569298 PKD1L2Q7Z442 2459 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 ZNF407Q9C0G0 2248 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 IGHV4-30-2A0A087WSY4 118 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 LRCOL1A6NCL2 159 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 BSPH1Q075Z2 132 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 FAM208BQ5VWN6 2430 aa4.38□□□□□ -1.71
KARS-211ENST00000569298 CACNA1EQ15878 2313 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 IGHV3-16A0A0C4DH30 117 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 IGLV1-47P01700 117 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 IGHV3-53P01767 116 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.37□□□□□ -1.71
KARS-211ENST00000569298 ZNF843Q8N446 348 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 KAAG1Q9UBP8 84 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 S4R3C0 116 aa4.37□□□□□ -1.71
KARS-211ENST00000569298 IGSF10Q6WRI0 2623 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 IGHV3-64DA0A0J9YX35 117 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 IGHV4-59P01825 116 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 ATMQ13315 3056 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 FREM1Q5H8C1 2179 aa4.36□□□□□ -1.71
KARS-211ENST00000569298 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.35□□□□□ -1.71
KARS-211ENST00000569298 IGHV3OR16-12A0A075B7B8 117 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 A0A096LNT2 108 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 NDUFA4O00483 81 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 IGHV1-8P0DP01 117 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 PLA2G2AP14555 144 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 COX6A2Q02221 97 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
KARS-211ENST00000569298 DEFB119Q8N690 84 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 DEFB124Q8NES8 71 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 LINC00467Q9BRT7 94 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 FASNP49327 2511 aaKnown RBP4.35□□□□□ -1.71
KARS-211ENST00000569298 GCN1Q92616 2671 aaKnown RBP4.35□□□□□ -1.71
KARS-211ENST00000569298 BOD1L1Q8NFC6 3051 aa4.35□□□□□ -1.71
KARS-211ENST00000569298 CFAP46Q8IYW2 2715 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 IGLV4-60A0A075B6I1 120 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 IGHV1-46P01743 117 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 IGHV1-2P23083 117 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 LINC00158P58513 81 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 NANOS2P60321 138 aaKnown RBP4.34□□□□□ -1.71
KARS-211ENST00000569298 LMO4P61968 165 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 COX17Q14061 63 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
KARS-211ENST00000569298 RTTNQ86VV8 2226 aa4.34□□□□□ -1.72
KARS-211ENST00000569298 MGAQ8IWI9 3026 aa4.34□□□□□ -1.72
KARS-211ENST00000569298 KNL1Q8NG31 2342 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 PCNX2A6NKB5 2137 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 RTL8CO15255 209 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 WFDC10AQ9H1F0 79 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 ZNF702PQ9H963 129 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 BAHCC1Q9P281 2608 aa4.33□□□□□ -1.72
KARS-211ENST00000569298 ASCC3Q8N3C0 2202 aaKnown RBP4.33□□□□□ -1.72
KARS-211ENST00000569298 SETXQ7Z333 2677 aaKnown RBP4.32□□□□□ -1.72
KARS-211ENST00000569298 IGHV3-66A0A0C4DH42 116 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 CCL3L1P16619 93 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 FDCSPQ8NFU4 85 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 ZNF706Q9Y5V0 76 aaPredicted RBP4.32□□□□□ -1.72
KARS-211ENST00000569298 FLNBO75369 2602 aaKnown RBP4.32□□□□□ -1.72
KARS-211ENST00000569298 COL12A1Q99715 3063 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 APC2O95996 2303 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 ACACAQ13085 2346 aa4.32□□□□□ -1.72
KARS-211ENST00000569298 HELZ2Q9BYK8 2649 aaKnown RBP4.31□□□□□ -1.72
KARS-211ENST00000569298 M0R2N4 97 aa4.31□□□□□ -1.72
KARS-211ENST00000569298 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 1619 ms