RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 E9PLD3 99 aa6.65□□□□□ -1.34
HERPUD1-216ENST00000568814 LEPROTO15243 131 aa6.65□□□□□ -1.34
HERPUD1-216ENST00000568814 RNF151Q2KHN1 245 aa6.65□□□□□ -1.34
HERPUD1-216ENST00000568814 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
HERPUD1-216ENST00000568814 DNAH10Q8IVF4 4471 aa6.65□□□□□ -1.34
HERPUD1-216ENST00000568814 HSBP1L1C9JCN9 74 aa6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 ATOH7Q8N100 152 aa6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 DNAH2Q9P225 4427 aa6.64□□□□□ -1.35
HERPUD1-216ENST00000568814 J3QQQ9 107 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 SLPIP03973 132 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 NMUP48645 174 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 Q6ZRU5 148 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 STPG4Q8N801 248 aa6.63□□□□□ -1.35
HERPUD1-216ENST00000568814 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
HERPUD1-216ENST00000568814 HERV-K104P63124 156 aa6.62□□□□□ -1.35
HERPUD1-216ENST00000568814 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
HERPUD1-216ENST00000568814 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
HERPUD1-216ENST00000568814 GCSHP23434 173 aa6.61□□□□□ -1.35
HERPUD1-216ENST00000568814 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-216ENST00000568814 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-216ENST00000568814 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
HERPUD1-216ENST00000568814 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
HERPUD1-216ENST00000568814 TLX1NBP0CAT3 122 aa6.59□□□□□ -1.35
HERPUD1-216ENST00000568814 COX17Q14061 63 aa6.59□□□□□ -1.35
HERPUD1-216ENST00000568814 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
HERPUD1-216ENST00000568814 PYY3Q5JQD4 70 aa6.59□□□□□ -1.35
HERPUD1-216ENST00000568814 IGKV2D-26A0A0A0MRZ7 120 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 NDUFC2-KCTD14E9PQ53 114 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 FUSP35637 526 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
HERPUD1-216ENST00000568814 ZNF815PA8K554 130 aa6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 MAJINQ3KP22 176 aa6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 MEIG1Q5JSS6 88 aa6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
HERPUD1-216ENST00000568814 C9orf116Q5BN46 136 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-216ENST00000568814 LOC105371267A0A1B0GV96 52 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 SMIM6P0DI80 62 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 PFN2P35080 140 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 S100A12P80511 92 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 CIRBPQ14011 172 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 SPATA45Q537H7 98 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
HERPUD1-216ENST00000568814 A0A096LNI7 61 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 LINC00158P58513 81 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 SCGB1D4Q6XE38 83 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 Q6ZRP5 223 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 Q6ZSA8 131 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 PCP2Q8IVA1 136 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 TTTY13Q9BZ97 58 aa6.54□□□□□ -1.36
HERPUD1-216ENST00000568814 HERC1Q15751 4861 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 TIMM17BO60830 172 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 COX8AP10176 69 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
HERPUD1-216ENST00000568814 DLEU1O43261 78 aa6.52□□□□□ -1.37
HERPUD1-216ENST00000568814 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
HERPUD1-216ENST00000568814 PKD1P98161 4303 aa6.52□□□□□ -1.37
HERPUD1-216ENST00000568814 TMEM238C9JI98 176 aa6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 DPH3Q96FX2 82 aa6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-216ENST00000568814 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
HERPUD1-216ENST00000568814 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
HERPUD1-216ENST00000568814 SLC25A34Q6PIV7 304 aa6.5□□□□□ -1.37
HERPUD1-216ENST00000568814 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
HERPUD1-216ENST00000568814 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
HERPUD1-216ENST00000568814 PANO1I0J062 215 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 Q6ZVH6 145 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 C14orf144Q96I85 54 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 LITAFQ99732 161 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
HERPUD1-216ENST00000568814 A0A087WYN8 130 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms