RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 AKR1D1P51857 326 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 CKS1BP61024 79 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 HERVK_113P61574 105 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 UNQ6190/PRO20217Q6UXQ8 127 aa10.16□□□□□ -0.78
SPG7-218ENST00000568205 PKHD1P08F94 4074 aa10.15□□□□□ -0.78
SPG7-218ENST00000568205 CXCL5P42830 114 aa10.15□□□□□ -0.78
SPG7-218ENST00000568205 EPPK1P58107 5090 aaKnown RBP10.13□□□□□ -0.79
SPG7-218ENST00000568205 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
SPG7-218ENST00000568205 RNF151Q2KHN1 245 aa10.13□□□□□ -0.79
SPG7-218ENST00000568205 ATOH7Q8N100 152 aa10.13□□□□□ -0.79
SPG7-218ENST00000568205 C6orf48Q9UBA6 75 aa10.13□□□□□ -0.79
SPG7-218ENST00000568205 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
SPG7-218ENST00000568205 LEPROTO15243 131 aa10.12□□□□□ -0.79
SPG7-218ENST00000568205 STPG4Q8N801 248 aa10.12□□□□□ -0.79
SPG7-218ENST00000568205 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
SPG7-218ENST00000568205 E9PLD3 99 aa10.11□□□□□ -0.79
SPG7-218ENST00000568205 SCGB1D1O95968 90 aa10.11□□□□□ -0.79
SPG7-218ENST00000568205 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
SPG7-218ENST00000568205 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
SPG7-218ENST00000568205 TSPEAR-AS2P59090 65 aa10.1□□□□□ -0.79
SPG7-218ENST00000568205 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
SPG7-218ENST00000568205 PKIGQ9Y2B9 76 aa10.1□□□□□ -0.79
SPG7-218ENST00000568205 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
SPG7-218ENST00000568205 J3QQQ9 107 aa10.09□□□□□ -0.79
SPG7-218ENST00000568205 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
SPG7-218ENST00000568205 C9orf116Q5BN46 136 aaPredicted RBP10.08□□□□□ -0.8
SPG7-218ENST00000568205 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
SPG7-218ENST00000568205 LGALS3P17931 250 aaKnown RBP10.07□□□□□ -0.8
SPG7-218ENST00000568205 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
SPG7-218ENST00000568205 DNAH8Q96JB1 4490 aa10.06□□□□□ -0.8
SPG7-218ENST00000568205 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
SPG7-218ENST00000568205 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
SPG7-218ENST00000568205 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
SPG7-218ENST00000568205 A0A096LNI7 61 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 IGKV2D-26A0A0A0MRZ7 120 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 NMUP48645 174 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 Q6ZSA8 131 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
SPG7-218ENST00000568205 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 HERV-K104P63124 156 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
SPG7-218ENST00000568205 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
SPG7-218ENST00000568205 PANO1I0J062 215 aa10.03□□□□□ -0.8
SPG7-218ENST00000568205 PTTG1IPP53801 180 aa10.03□□□□□ -0.8
SPG7-218ENST00000568205 Q6ZRP5 223 aa10.03□□□□□ -0.8
SPG7-218ENST00000568205 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
SPG7-218ENST00000568205 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
SPG7-218ENST00000568205 PFN2P35080 140 aa10.01□□□□□ -0.81
SPG7-218ENST00000568205 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
SPG7-218ENST00000568205 PYY3Q5JQD4 70 aa10.01□□□□□ -0.81
SPG7-218ENST00000568205 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
SPG7-218ENST00000568205 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
SPG7-218ENST00000568205 COX17Q14061 63 aa10□□□□□ -0.81
SPG7-218ENST00000568205 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
SPG7-218ENST00000568205 TTTY13Q9BZ97 58 aa10□□□□□ -0.81
SPG7-218ENST00000568205 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
SPG7-218ENST00000568205 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
SPG7-218ENST00000568205 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
SPG7-218ENST00000568205 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 LINC00587B1AMM8 73 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 LINC00158P58513 81 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 SCXQ7RTU7 201 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
SPG7-218ENST00000568205 A0A0J9YXY3 114 aa9.97□□□□□ -0.81
SPG7-218ENST00000568205 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
SPG7-218ENST00000568205 HAMPP81172 84 aa9.97□□□□□ -0.81
SPG7-218ENST00000568205 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
SPG7-218ENST00000568205 XAGE1AQ9HD64 81 aa9.97□□□□□ -0.81
SPG7-218ENST00000568205 A0A087WYN8 130 aa9.96□□□□□ -0.82
SPG7-218ENST00000568205 XGP55808 180 aa9.96□□□□□ -0.82
SPG7-218ENST00000568205 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
SPG7-218ENST00000568205 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
SPG7-218ENST00000568205 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
SPG7-218ENST00000568205 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
SPG7-218ENST00000568205 PAM16Q9Y3D7 125 aa9.95□□□□□ -0.82
SPG7-218ENST00000568205 SPATA45Q537H7 98 aa9.94□□□□□ -0.82
SPG7-218ENST00000568205 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
SPG7-218ENST00000568205 A0A1W2PNN7 141 aa9.93□□□□□ -0.82
SPG7-218ENST00000568205 LOC105371267A0A1B0GV96 52 aa9.92□□□□□ -0.82
SPG7-218ENST00000568205 FAM168BA1KXE4 195 aa9.92□□□□□ -0.82
SPG7-218ENST00000568205 TIMM17BO60830 172 aa9.92□□□□□ -0.82
SPG7-218ENST00000568205 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
SPG7-218ENST00000568205 EPM2AB3EWF7 344 aa9.91□□□□□ -0.82
SPG7-218ENST00000568205 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
SPG7-218ENST00000568205 DAND5Q8N907 189 aa9.91□□□□□ -0.82
SPG7-218ENST00000568205 LITAFQ99732 161 aa9.91□□□□□ -0.82
SPG7-218ENST00000568205 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
SPG7-218ENST00000568205 COX8AP10176 69 aa9.9□□□□□ -0.82
SPG7-218ENST00000568205 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
SPG7-218ENST00000568205 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms