RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 XGP55808 180 aa10.81□□□□□ -0.68
CLN6-208ENST00000567060 KIAA0087Q14695 138 aa10.81□□□□□ -0.68
CLN6-208ENST00000567060 PET117Q6UWS5 81 aa10.81□□□□□ -0.68
CLN6-208ENST00000567060 SYS1-DBNDD2H3BUS1 97 aa10.8□□□□□ -0.68
CLN6-208ENST00000567060 S100A2P29034 98 aa10.8□□□□□ -0.68
CLN6-208ENST00000567060 TMEM170BQ5T4T1 132 aa10.8□□□□□ -0.68
CLN6-208ENST00000567060 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
CLN6-208ENST00000567060 DPM2O94777 84 aa10.79□□□□□ -0.68
CLN6-208ENST00000567060 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLN6-208ENST00000567060 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
CLN6-208ENST00000567060 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
CLN6-208ENST00000567060 TRBV30A0A0K0K1B3 111 aa10.78□□□□□ -0.68
CLN6-208ENST00000567060 H0Y8G0 127 aa10.78□□□□□ -0.68
CLN6-208ENST00000567060 CKS1BP61024 79 aa10.78□□□□□ -0.68
CLN6-208ENST00000567060 HIST3H2BBQ8N257 126 aa10.78□□□□□ -0.68
CLN6-208ENST00000567060 KRTAP10-1P60331 282 aa10.77□□□□□ -0.69
CLN6-208ENST00000567060 Q6ZRU5 148 aa10.77□□□□□ -0.69
CLN6-208ENST00000567060 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
CLN6-208ENST00000567060 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.69
CLN6-208ENST00000567060 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 C20orf202A1L168 122 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 IGKCP01834 107 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 Q6ZSA8 131 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 LINC00526Q96FQ7 95 aa10.76□□□□□ -0.69
CLN6-208ENST00000567060 C5orf52A6NGY3 159 aa10.75□□□□□ -0.69
CLN6-208ENST00000567060 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
CLN6-208ENST00000567060 Q5VSD8 79 aa10.75□□□□□ -0.69
CLN6-208ENST00000567060 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
CLN6-208ENST00000567060 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
CLN6-208ENST00000567060 HERVK_113P61574 105 aa10.74□□□□□ -0.69
CLN6-208ENST00000567060 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
CLN6-208ENST00000567060 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
CLN6-208ENST00000567060 LOC107984640A0A0U1RRK4 108 aa10.73□□□□□ -0.69
CLN6-208ENST00000567060 SNRPEP62304 92 aaKnown RBP10.73□□□□□ -0.69
CLN6-208ENST00000567060 KRTDAPP60985 99 aa10.72□□□□□ -0.69
CLN6-208ENST00000567060 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
CLN6-208ENST00000567060 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
CLN6-208ENST00000567060 LINC01620Q4KN68 170 aa10.71□□□□□ -0.69
CLN6-208ENST00000567060 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.69
CLN6-208ENST00000567060 C2orf82Q6UX34 121 aa10.7□□□□□ -0.7
CLN6-208ENST00000567060 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
CLN6-208ENST00000567060 UBR4Q5T4S7 5183 aa10.7□□□□□ -0.7
CLN6-208ENST00000567060 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
CLN6-208ENST00000567060 NDUFC2-KCTD14E9PQ53 114 aa10.68□□□□□ -0.7
CLN6-208ENST00000567060 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
CLN6-208ENST00000567060 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
CLN6-208ENST00000567060 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
CLN6-208ENST00000567060 LEPROTO15243 131 aa10.67□□□□□ -0.7
CLN6-208ENST00000567060 PTTG1IPP53801 180 aa10.67□□□□□ -0.7
CLN6-208ENST00000567060 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
CLN6-208ENST00000567060 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
CLN6-208ENST00000567060 NMUP48645 174 aa10.66□□□□□ -0.7
CLN6-208ENST00000567060 HERV-K104P63124 156 aa10.66□□□□□ -0.7
CLN6-208ENST00000567060 COX17Q14061 63 aa10.66□□□□□ -0.7
CLN6-208ENST00000567060 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
CLN6-208ENST00000567060 A0A096LNI7 61 aa10.65□□□□□ -0.7
CLN6-208ENST00000567060 E9PLD3 99 aa10.65□□□□□ -0.7
CLN6-208ENST00000567060 ZNF625Q96I27 306 aaPredicted RBP10.65□□□□□ -0.7
CLN6-208ENST00000567060 RPL18AQ02543 176 aaKnown RBP10.64□□□□□ -0.71
CLN6-208ENST00000567060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.64□□□□□ -0.71
CLN6-208ENST00000567060 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
CLN6-208ENST00000567060 J3QQQ9 107 aa10.63□□□□□ -0.71
CLN6-208ENST00000567060 GAGE2BQ13066 116 aa10.63□□□□□ -0.71
CLN6-208ENST00000567060 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 LGALS3P17931 250 aaKnown RBP10.62□□□□□ -0.71
CLN6-208ENST00000567060 HAMPP81172 84 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 MAJINQ3KP22 176 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 Q6ZRP5 223 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 SCXQ7RTU7 201 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 DPH3Q96FX2 82 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 NDUFA12Q9UI09 145 aa10.62□□□□□ -0.71
CLN6-208ENST00000567060 LRP1Q07954 4544 aaKnown RBP10.61□□□□□ -0.71
CLN6-208ENST00000567060 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
CLN6-208ENST00000567060 ERG28Q9UKR5 140 aa10.61□□□□□ -0.71
CLN6-208ENST00000567060 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
CLN6-208ENST00000567060 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
CLN6-208ENST00000567060 A0A087WYN8 130 aa10.59□□□□□ -0.71
CLN6-208ENST00000567060 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
CLN6-208ENST00000567060 PANO1I0J062 215 aa10.58□□□□□ -0.72
CLN6-208ENST00000567060 J3QL48 77 aa10.58□□□□□ -0.72
CLN6-208ENST00000567060 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
CLN6-208ENST00000567060 STPG4Q8N801 248 aa10.58□□□□□ -0.72
CLN6-208ENST00000567060 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
CLN6-208ENST00000567060 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
CLN6-208ENST00000567060 TSPEAR-AS2P59090 65 aa10.56□□□□□ -0.72
CLN6-208ENST00000567060 TMA7Q9Y2S6 64 aaKnown RBP10.56□□□□□ -0.72
CLN6-208ENST00000567060 FAT3Q8TDW7 4589 aa10.56□□□□□ -0.72
CLN6-208ENST00000567060 SCGB1D1O95968 90 aa10.55□□□□□ -0.72
CLN6-208ENST00000567060 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
CLN6-208ENST00000567060 PLA2G2DQ9UNK4 145 aa10.55□□□□□ -0.72
CLN6-208ENST00000567060 PFN2P35080 140 aa10.54□□□□□ -0.72
CLN6-208ENST00000567060 LINC00158P58513 81 aa10.53□□□□□ -0.72
CLN6-208ENST00000567060 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
CLN6-208ENST00000567060 KRTAP29-1A8MX34 341 aaPredicted RBP10.52□□□□□ -0.73
CLN6-208ENST00000567060 JOSD1Q15040 202 aaPredicted RBP10.52□□□□□ -0.73
CLN6-208ENST00000567060 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms