RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
HERC2-208ENST00000566635 A0A0J9YXY3 114 aa11.84□□□□□ -0.51
HERC2-208ENST00000566635 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
HERC2-208ENST00000566635 MALP21145 153 aa11.84□□□□□ -0.51
HERC2-208ENST00000566635 C1orf43Q9BWL3 253 aa11.84□□□□□ -0.51
HERC2-208ENST00000566635 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
HERC2-208ENST00000566635 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.52
HERC2-208ENST00000566635 NAA38Q9BRA0 125 aaKnown RBP11.83□□□□□ -0.52
HERC2-208ENST00000566635 KRTAP1-5Q9BYS1 174 aa11.83□□□□□ -0.52
HERC2-208ENST00000566635 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
HERC2-208ENST00000566635 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
HERC2-208ENST00000566635 SIGMAR1Q99720 223 aa11.83□□□□□ -0.52
HERC2-208ENST00000566635 WWC2-AS2Q96NR7 200 aa11.81□□□□□ -0.52
HERC2-208ENST00000566635 Q8IZM0 81 aa11.8□□□□□ -0.52
HERC2-208ENST00000566635 DNAH10Q8IVF4 4471 aa11.79□□□□□ -0.52
HERC2-208ENST00000566635 F8W1H4 67 aa11.79□□□□□ -0.52
HERC2-208ENST00000566635 KIAA0087Q14695 138 aa11.79□□□□□ -0.52
HERC2-208ENST00000566635 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
HERC2-208ENST00000566635 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
HERC2-208ENST00000566635 A0A1B0GV72 72 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 PRSS2P07478 247 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
HERC2-208ENST00000566635 J3QR89 54 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 GCSHP23434 173 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 C6orf226Q5I0X4 101 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 LITAFQ99732 161 aa11.78□□□□□ -0.52
HERC2-208ENST00000566635 APOMO95445 188 aa11.77□□□□□ -0.52
HERC2-208ENST00000566635 FXYD2P54710 66 aa11.77□□□□□ -0.52
HERC2-208ENST00000566635 SPANXB1Q9NS25 103 aaPredicted RBP11.77□□□□□ -0.52
HERC2-208ENST00000566635 SPAG11BQ08648 103 aa11.77□□□□□ -0.53
HERC2-208ENST00000566635 CASC10Q5T4H9 136 aa11.76□□□□□ -0.53
HERC2-208ENST00000566635 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
HERC2-208ENST00000566635 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
HERC2-208ENST00000566635 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
HERC2-208ENST00000566635 SRSF9Q13242 221 aaKnown RBP eCLIP11.75□□□□□ -0.53
HERC2-208ENST00000566635 CEND1Q8N111 149 aa11.75□□□□□ -0.53
HERC2-208ENST00000566635 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
HERC2-208ENST00000566635 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
HERC2-208ENST00000566635 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
HERC2-208ENST00000566635 HERV-K104P63124 156 aa11.74□□□□□ -0.53
HERC2-208ENST00000566635 TAL2Q16559 108 aa11.74□□□□□ -0.53
HERC2-208ENST00000566635 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
HERC2-208ENST00000566635 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
HERC2-208ENST00000566635 DAND5Q8N907 189 aa11.74□□□□□ -0.53
HERC2-208ENST00000566635 CKS1BP61024 79 aa11.73□□□□□ -0.53
HERC2-208ENST00000566635 RMI2Q96E14 147 aa11.72□□□□□ -0.53
HERC2-208ENST00000566635 NBDYA0A0U1RRE5 68 aa11.72□□□□□ -0.53
HERC2-208ENST00000566635 TIMM17BO60830 172 aa11.72□□□□□ -0.53
HERC2-208ENST00000566635 NPC2P61916 151 aa11.71□□□□□ -0.53
HERC2-208ENST00000566635 CXCL5P42830 114 aa11.71□□□□□ -0.54
HERC2-208ENST00000566635 C10orf25Q5T742 122 aa11.71□□□□□ -0.54
HERC2-208ENST00000566635 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.54
HERC2-208ENST00000566635 SPANXCQ9NY87 97 aa11.71□□□□□ -0.54
HERC2-208ENST00000566635 WFDC2Q14508 124 aa11.7□□□□□ -0.54
HERC2-208ENST00000566635 SFTA2Q6UW10 78 aa11.7□□□□□ -0.54
HERC2-208ENST00000566635 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
HERC2-208ENST00000566635 K7ERJ3 54 aa11.69□□□□□ -0.54
HERC2-208ENST00000566635 TTC32Q5I0X7 151 aa11.69□□□□□ -0.54
HERC2-208ENST00000566635 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
HERC2-208ENST00000566635 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
HERC2-208ENST00000566635 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
HERC2-208ENST00000566635 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
HERC2-208ENST00000566635 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
HERC2-208ENST00000566635 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
HERC2-208ENST00000566635 C9orf116Q5BN46 136 aaPredicted RBP11.68□□□□□ -0.54
HERC2-208ENST00000566635 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 A0A1B0GWB2 263 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 M0R2N4 97 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 PFN2P35080 140 aa11.68□□□□□ -0.54
HERC2-208ENST00000566635 LECT2O14960 151 aa11.67□□□□□ -0.54
HERC2-208ENST00000566635 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
HERC2-208ENST00000566635 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
HERC2-208ENST00000566635 LINC00158P58513 81 aa11.66□□□□□ -0.54
HERC2-208ENST00000566635 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.54
HERC2-208ENST00000566635 C3orf84H3BNL1 204 aa11.65□□□□□ -0.55
HERC2-208ENST00000566635 SOSTDC1Q6X4U4 206 aa11.65□□□□□ -0.55
HERC2-208ENST00000566635 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.55
HERC2-208ENST00000566635 H3BMG7 143 aa11.64□□□□□ -0.55
HERC2-208ENST00000566635 LY6G6CO95867 125 aa11.64□□□□□ -0.55
HERC2-208ENST00000566635 ETDBQ3ZM63 59 aa11.64□□□□□ -0.55
HERC2-208ENST00000566635 LINC00308Q8TCZ7 52 aa11.64□□□□□ -0.55
HERC2-208ENST00000566635 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
HERC2-208ENST00000566635 DNAH2Q9P225 4427 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 A4D1N5 150 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 MTURNQ8N3F0 131 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 PSCAO43653 123 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 Q6ZRU5 148 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
HERC2-208ENST00000566635 C2orf48Q96LS8 159 aa11.62□□□□□ -0.55
HERC2-208ENST00000566635 DNAH6Q9C0G6 4158 aa11.62□□□□□ -0.55
HERC2-208ENST00000566635 A6NJY4 79 aa11.62□□□□□ -0.55
HERC2-208ENST00000566635 IFITM1P13164 125 aa11.61□□□□□ -0.55
HERC2-208ENST00000566635 Q6ZRN7 208 aaPredicted RBP11.6□□□□□ -0.55
HERC2-208ENST00000566635 Q6ZR54 194 aa11.59□□□□□ -0.55
HERC2-208ENST00000566635 SLPIP03973 132 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms