RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
FANCA-220ENST00000566409 Q8IZM0 81 aa8.94□□□□□ -0.98
FANCA-220ENST00000566409 PACRGQ96M98 296 aaPredicted RBP8.94□□□□□ -0.98
FANCA-220ENST00000566409 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
FANCA-220ENST00000566409 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
FANCA-220ENST00000566409 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
FANCA-220ENST00000566409 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 PRSS2P07478 247 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 CKS1BP61024 79 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 SEC11AP67812 179 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 FABP9Q0Z7S8 132 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 GEMIN7Q9H840 131 aaKnown RBP8.92□□□□□ -0.98
FANCA-220ENST00000566409 RPS10P5Q9NQ39 176 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 LRP2P98164 4655 aa8.92□□□□□ -0.98
FANCA-220ENST00000566409 M0QXV9 152 aa8.91□□□□□ -0.98
FANCA-220ENST00000566409 RHEBQ15382 184 aa8.91□□□□□ -0.98
FANCA-220ENST00000566409 COX19Q49B96 90 aa8.91□□□□□ -0.98
FANCA-220ENST00000566409 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
FANCA-220ENST00000566409 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
FANCA-220ENST00000566409 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.98
FANCA-220ENST00000566409 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
FANCA-220ENST00000566409 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
FANCA-220ENST00000566409 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
FANCA-220ENST00000566409 A0A096LNJ9 63 aa8.89□□□□□ -0.99
FANCA-220ENST00000566409 F8VRH5 84 aa8.89□□□□□ -0.99
FANCA-220ENST00000566409 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
FANCA-220ENST00000566409 FA2HQ7L5A8 372 aa8.88□□□□□ -0.99
FANCA-220ENST00000566409 LINC01549A6NIU2 74 aa8.87□□□□□ -0.99
FANCA-220ENST00000566409 PMVKQ15126 192 aa8.87□□□□□ -0.99
FANCA-220ENST00000566409 PDZD11Q5EBL8 140 aa8.87□□□□□ -0.99
FANCA-220ENST00000566409 UBE2BP63146 152 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 DIRC1Q969H9 104 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 SMCO4Q9NRQ5 59 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
FANCA-220ENST00000566409 H0Y9J4 135 aa8.85□□□□□ -0.99
FANCA-220ENST00000566409 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
FANCA-220ENST00000566409 TRAPPC1Q9Y5R8 145 aa8.85□□□□□ -0.99
FANCA-220ENST00000566409 APOC3P02656 99 aa8.84□□□□□ -0.99
FANCA-220ENST00000566409 CXCL5P42830 114 aa8.84□□□□□ -0.99
FANCA-220ENST00000566409 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
FANCA-220ENST00000566409 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
FANCA-220ENST00000566409 PMCHL1Q16048 86 aa8.83□□□□□ -1
FANCA-220ENST00000566409 LINC00614P0C842 121 aa8.82□□□□□ -1
FANCA-220ENST00000566409 IGLC3P0DOY3 106 aa8.82□□□□□ -1
FANCA-220ENST00000566409 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
FANCA-220ENST00000566409 YPEL4Q96NS1 127 aa8.81□□□□□ -1
FANCA-220ENST00000566409 SNAPINO95295 136 aa8.8□□□□□ -1
FANCA-220ENST00000566409 RAB5BP61020 215 aa8.8□□□□□ -1
FANCA-220ENST00000566409 TP73-AS1Q9UF72 201 aa8.8□□□□□ -1
FANCA-220ENST00000566409 RNF213Q63HN8 5207 aa8.79□□□□□ -1
FANCA-220ENST00000566409 HBDP02042 147 aa8.79□□□□□ -1
FANCA-220ENST00000566409 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
FANCA-220ENST00000566409 NDUFA6P56556 154 aa8.79□□□□□ -1
FANCA-220ENST00000566409 LBHQ53QV2 105 aaPredicted RBP8.79□□□□□ -1
FANCA-220ENST00000566409 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
FANCA-220ENST00000566409 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
FANCA-220ENST00000566409 SVBPQ8N300 66 aa8.79□□□□□ -1
FANCA-220ENST00000566409 H3BRM9 83 aa8.78□□□□□ -1
FANCA-220ENST00000566409 ZNF861PO60384 105 aa8.78□□□□□ -1
FANCA-220ENST00000566409 LINC00167Q96N53 147 aa8.78□□□□□ -1
FANCA-220ENST00000566409 LPAP08519 4548 aa8.78□□□□□ -1
FANCA-220ENST00000566409 C11orf86A6NJI1 115 aa8.76□□□□□ -1.01
FANCA-220ENST00000566409 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
FANCA-220ENST00000566409 NUPR1O60356 82 aa8.76□□□□□ -1.01
FANCA-220ENST00000566409 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
FANCA-220ENST00000566409 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
FANCA-220ENST00000566409 ATP5LO75964 103 aa8.75□□□□□ -1.01
FANCA-220ENST00000566409 NDUFA5Q16718 116 aa8.75□□□□□ -1.01
FANCA-220ENST00000566409 BAGE3Q86Y29 109 aa8.75□□□□□ -1.01
FANCA-220ENST00000566409 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
FANCA-220ENST00000566409 PFN2P35080 140 aa8.74□□□□□ -1.01
FANCA-220ENST00000566409 BCE1O60756 84 aa8.73□□□□□ -1.01
FANCA-220ENST00000566409 SCO1O75880 301 aa8.73□□□□□ -1.01
FANCA-220ENST00000566409 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
FANCA-220ENST00000566409 CBLN2Q8IUK8 224 aa8.71□□□□□ -1.02
FANCA-220ENST00000566409 Q8NDZ9 215 aa8.71□□□□□ -1.02
FANCA-220ENST00000566409 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
FANCA-220ENST00000566409 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.02
FANCA-220ENST00000566409 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
FANCA-220ENST00000566409 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
FANCA-220ENST00000566409 CHCHD1Q96BP2 118 aaKnown RBP8.7□□□□□ -1.02
FANCA-220ENST00000566409 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
FANCA-220ENST00000566409 VPREB1P12018 145 aa8.69□□□□□ -1.02
FANCA-220ENST00000566409 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
FANCA-220ENST00000566409 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
FANCA-220ENST00000566409 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
FANCA-220ENST00000566409 A0A087X002 238 aa8.68□□□□□ -1.02
FANCA-220ENST00000566409 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
FANCA-220ENST00000566409 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
FANCA-220ENST00000566409 COX17Q14061 63 aa8.68□□□□□ -1.02
FANCA-220ENST00000566409 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
FANCA-220ENST00000566409 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
FANCA-220ENST00000566409 TMEM223A0PJW6 202 aa8.67□□□□□ -1.02
FANCA-220ENST00000566409 FAM19A2Q8N3H0 131 aa8.67□□□□□ -1.02
FANCA-220ENST00000566409 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
FANCA-220ENST00000566409 TRGC2P03986 189 aa8.65□□□□□ -1.02
FANCA-220ENST00000566409 LINC00310P59036 64 aa8.65□□□□□ -1.02
FANCA-220ENST00000566409 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms