RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 HMGN4O00479 90 aa2□□□□□ -2.09
CCNDBP1-207ENST00000565958 FCER1GP30273 86 aa2□□□□□ -2.09
CCNDBP1-207ENST00000565958 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
CCNDBP1-207ENST00000565958 MUSTN1Q8IVN3 82 aa2□□□□□ -2.09
CCNDBP1-207ENST00000565958 SHPRHQ149N8 1683 aa1.99□□□□□ -2.09
CCNDBP1-207ENST00000565958 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
CCNDBP1-207ENST00000565958 IGHV3-33P01772 117 aa1.99□□□□□ -2.09
CCNDBP1-207ENST00000565958 SAA2P0DJI9 122 aaPredicted RBP1.99□□□□□ -2.09
CCNDBP1-207ENST00000565958 FDCSPQ8NFU4 85 aa1.99□□□□□ -2.09
CCNDBP1-207ENST00000565958 SAMD9LQ8IVG5 1584 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 MED13Q9UHV7 2174 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 TRBV7-4A0A0J9YYF1 115 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 TRBV10-1A0A0K0K1A3 114 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 K7EMI3 77 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 SNRPGP62308 76 aaKnown RBP1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 COL4A1P02462 1669 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 COL4A5P29400 1685 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 ZNF831Q5JPB2 1677 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 DEPDC5O75140 1603 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 BCORQ6W2J9 1755 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 DLEC1Q9Y238 1755 aa1.98□□□□□ -2.09
CCNDBP1-207ENST00000565958 DOT1LQ8TEK3 1739 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 E9PCH4 1651 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 CLPSL1A2RUU4 121 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 PPP1R17O96001 155 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 IFI6P09912 130 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 HMGA1P17096 107 aaKnown RBP1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 ELOF1P60002 83 aaKnown RBP1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 ZNF833PQ6ZTB9 187 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 ORMDL1Q9P0S3 153 aa1.97□□□□□ -2.09
CCNDBP1-207ENST00000565958 CR1P17927 2039 aa1.96□□□□□ -2.09
CCNDBP1-207ENST00000565958 TRAV1-2A0A0B4J238 106 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 A0A0J9YY99 117 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 TRBV30A0A0K0K1B3 111 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 DNAL4O96015 105 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGHV3-30P01768 117 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGHV3-30-5P0DP03 117 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 KRTAP26-1Q6PEX3 210 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 NRAPQ86VF7 1730 aa1.96□□□□□ -2.1
CCNDBP1-207ENST00000565958 MYO7AQ13402 2215 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 NRXN2Q9P2S2 1712 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 HIGD1CA8MV81 97 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 M0R3E3 92 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 SPAG11BQ08648 103 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 DEFB119Q8N690 84 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 PATE1Q8WXA2 126 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 MRPL36Q9P0J6 103 aaKnown RBP1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 TNRC6BQ9UPQ9 1833 aaKnown RBP1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 SLIT1O75093 1534 aa1.95□□□□□ -2.1
CCNDBP1-207ENST00000565958 HEATR1Q9H583 2144 aaKnown RBP1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 ARFGEF3Q5TH69 2177 aa1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 INTS1Q8N201 2190 aaKnown RBP1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 SMIM27A0A1W2PRY6 76 aa1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 NUPR2A6NF83 97 aa1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 DMAC1Q96GE9 116 aa1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 V9GYV3 84 aa1.94□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGKV2-40A0A087WW87 121 aaPredicted RBP1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 A0A1B0GUT8 65 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGKV2D-40P01614 121 aaPredicted RBP1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 NREPQ16612 68 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 FAM74A4Q5TZK3 123 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 DDX60Q8IY21 1712 aaKnown RBP1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 TOGARAM1Q9Y4F4 1720 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 MYO7BQ6PIF6 2116 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 SORL1Q92673 2214 aa1.93□□□□□ -2.1
CCNDBP1-207ENST00000565958 NCOA6Q14686 2063 aaPredicted RBP1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGKV3-7A0A075B6H7 116 aa1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 M0R2N4 97 aa1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 SERF2P84101 59 aa1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 ZGRF1Q86YA3 2104 aa1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
CCNDBP1-207ENST00000565958 LRRC37A3O60309 1634 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 CTXND1A0A1B0GTU2 59 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 F8VRH5 84 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 M0R135 149 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 SPINK4O60575 86 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 ENHOQ6UWT2 76 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 Q86TA4 180 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 LINC00846Q9NV44 126 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 TIMM8BQ9Y5J9 83 aaPredicted RBP1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 ZFHX3Q15911 3703 aa1.91□□□□□ -2.1
CCNDBP1-207ENST00000565958 FBN1P35555 2871 aaKnown RBP1.9□□□□□ -2.1
CCNDBP1-207ENST00000565958 DUOX1Q9NRD9 1551 aa1.9□□□□□ -2.1
CCNDBP1-207ENST00000565958 SPTBP11277 2137 aa1.9□□□□□ -2.1
CCNDBP1-207ENST00000565958 ESPL1Q14674 2120 aa1.9□□□□□ -2.1
CCNDBP1-207ENST00000565958 TRAV21A0A0B4J279 112 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 TRBV6-4A0A1B0GX49 114 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 INE1O15225 51 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 IL9P15248 144 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 PLNP26678 52 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 CCL18P55774 89 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 COX7B2Q8TF08 81 aa1.9□□□□□ -2.11
CCNDBP1-207ENST00000565958 AMELXQ99217 191 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms