RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 Q6ZRN7 208 aaPredicted RBP12.75□□□□□ -0.37
SPSB3-204ENST00000563741 LINC00526Q96FQ7 95 aa12.75□□□□□ -0.37
SPSB3-204ENST00000563741 CFAP161Q6P656 301 aa12.74□□□□□ -0.37
SPSB3-204ENST00000563741 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
SPSB3-204ENST00000563741 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
SPSB3-204ENST00000563741 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
SPSB3-204ENST00000563741 USP17L23D6RBM5 183 aa12.74□□□□□ -0.37
SPSB3-204ENST00000563741 RTL8CO15255 209 aa12.73□□□□□ -0.37
SPSB3-204ENST00000563741 PSCAO43653 123 aa12.73□□□□□ -0.37
SPSB3-204ENST00000563741 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
SPSB3-204ENST00000563741 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
SPSB3-204ENST00000563741 CXCL5P42830 114 aa12.72□□□□□ -0.37
SPSB3-204ENST00000563741 CKS1BP61024 79 aa12.72□□□□□ -0.37
SPSB3-204ENST00000563741 HIGD1BQ9P298 99 aa12.72□□□□□ -0.37
SPSB3-204ENST00000563741 LECT2O14960 151 aa12.71□□□□□ -0.37
SPSB3-204ENST00000563741 HERV-K104P63124 156 aa12.71□□□□□ -0.37
SPSB3-204ENST00000563741 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
SPSB3-204ENST00000563741 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
SPSB3-204ENST00000563741 ZNF561-AS1K7EIQ3 104 aa12.71□□□□□ -0.38
SPSB3-204ENST00000563741 WFDC2Q14508 124 aa12.71□□□□□ -0.38
SPSB3-204ENST00000563741 LITAFQ99732 161 aa12.69□□□□□ -0.38
SPSB3-204ENST00000563741 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
SPSB3-204ENST00000563741 CTAG1AP78358 180 aa12.68□□□□□ -0.38
SPSB3-204ENST00000563741 UNQ6190/PRO20217Q6UXQ8 127 aa12.68□□□□□ -0.38
SPSB3-204ENST00000563741 DNAH2Q9P225 4427 aa12.67□□□□□ -0.38
SPSB3-204ENST00000563741 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
SPSB3-204ENST00000563741 MEIG1Q5JSS6 88 aa12.66□□□□□ -0.38
SPSB3-204ENST00000563741 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
SPSB3-204ENST00000563741 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
SPSB3-204ENST00000563741 TIMM17BO60830 172 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 LINC00587B1AMM8 73 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 TMEM238C9JI98 176 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 ADAMTSL4-AS1Q5T5F5 129 aa12.65□□□□□ -0.38
SPSB3-204ENST00000563741 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
SPSB3-204ENST00000563741 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
SPSB3-204ENST00000563741 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
SPSB3-204ENST00000563741 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
SPSB3-204ENST00000563741 HSD52Q0P140 79 aa12.63□□□□□ -0.39
SPSB3-204ENST00000563741 Q6ZRU5 148 aa12.63□□□□□ -0.39
SPSB3-204ENST00000563741 C6orf48Q9UBA6 75 aa12.63□□□□□ -0.39
SPSB3-204ENST00000563741 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
SPSB3-204ENST00000563741 F8WDY8 70 aa12.62□□□□□ -0.39
SPSB3-204ENST00000563741 SLPIP03973 132 aa12.62□□□□□ -0.39
SPSB3-204ENST00000563741 C9orf116Q5BN46 136 aaPredicted RBP12.62□□□□□ -0.39
SPSB3-204ENST00000563741 DAND5Q8N907 189 aa12.62□□□□□ -0.39
SPSB3-204ENST00000563741 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
SPSB3-204ENST00000563741 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
SPSB3-204ENST00000563741 PFN2P35080 140 aa12.61□□□□□ -0.39
SPSB3-204ENST00000563741 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
SPSB3-204ENST00000563741 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPSB3-204ENST00000563741 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
SPSB3-204ENST00000563741 SPANXDQ9BXN6 97 aa12.6□□□□□ -0.39
SPSB3-204ENST00000563741 SPANXCQ9NY87 97 aa12.6□□□□□ -0.39
SPSB3-204ENST00000563741 TAL2Q16559 108 aa12.59□□□□□ -0.39
SPSB3-204ENST00000563741 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
SPSB3-204ENST00000563741 LINC00158P58513 81 aa12.59□□□□□ -0.39
SPSB3-204ENST00000563741 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
SPSB3-204ENST00000563741 COX17Q14061 63 aa12.58□□□□□ -0.4
SPSB3-204ENST00000563741 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
SPSB3-204ENST00000563741 GCSHP23434 173 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 HINT1P49773 126 aaPredicted RBP12.57□□□□□ -0.4
SPSB3-204ENST00000563741 TNP2Q05952 138 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 Q6ZVH6 145 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 A0A087WTM6 91 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 CEND1Q8N111 149 aa12.57□□□□□ -0.4
SPSB3-204ENST00000563741 EIF4EBP3O60516 100 aaPredicted RBP12.56□□□□□ -0.4
SPSB3-204ENST00000563741 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
SPSB3-204ENST00000563741 NPC2P61916 151 aa12.55□□□□□ -0.4
SPSB3-204ENST00000563741 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.54□□□□□ -0.4
SPSB3-204ENST00000563741 M0R143 59 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 FXYD2P54710 66 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 Q8N814 137 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 SOSTDC1Q6X4U4 206 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 LINC00308Q8TCZ7 52 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 SNHG12Q9BXW3 62 aa12.54□□□□□ -0.4
SPSB3-204ENST00000563741 EREGO14944 169 aa12.53□□□□□ -0.4
SPSB3-204ENST00000563741 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
SPSB3-204ENST00000563741 RNF151Q2KHN1 245 aa12.53□□□□□ -0.4
SPSB3-204ENST00000563741 IFITM1P13164 125 aa12.52□□□□□ -0.41
SPSB3-204ENST00000563741 BATFQ16520 125 aa12.52□□□□□ -0.41
SPSB3-204ENST00000563741 HECTD4Q9Y4D8 3996 aa12.52□□□□□ -0.41
SPSB3-204ENST00000563741 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
SPSB3-204ENST00000563741 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
SPSB3-204ENST00000563741 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
SPSB3-204ENST00000563741 FAT2Q9NYQ8 4349 aa12.5□□□□□ -0.41
SPSB3-204ENST00000563741 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
SPSB3-204ENST00000563741 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
SPSB3-204ENST00000563741 Q6ZRP5 223 aa12.48□□□□□ -0.41
SPSB3-204ENST00000563741 PPDPFQ9H3Y8 114 aa12.48□□□□□ -0.41
SPSB3-204ENST00000563741 A4D1N5 150 aa12.48□□□□□ -0.41
SPSB3-204ENST00000563741 COPS9Q8WXC6 57 aa12.48□□□□□ -0.41
SPSB3-204ENST00000563741 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.41
SPSB3-204ENST00000563741 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.41
SPSB3-204ENST00000563741 TMEM238LA0A1B0GVL6 79 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms