RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 Q8IZM0 81 aa15.28■□□□□ 0.04
PPP4C-206ENST00000563597 SCGB3A1Q96QR1 104 aa15.28■□□□□ 0.04
PPP4C-206ENST00000563597 FAM168BA1KXE4 195 aa15.27■□□□□ 0.04
PPP4C-206ENST00000563597 LINC01546A6NGU7 62 aa15.27■□□□□ 0.04
PPP4C-206ENST00000563597 GEMIN7Q9H840 131 aaKnown RBP15.27■□□□□ 0.04
PPP4C-206ENST00000563597 TOMM7Q9P0U1 55 aa15.27■□□□□ 0.04
PPP4C-206ENST00000563597 CKS1BP61024 79 aa15.26■□□□□ 0.03
PPP4C-206ENST00000563597 C6orf226Q5I0X4 101 aa15.26■□□□□ 0.03
PPP4C-206ENST00000563597 FAM19A5Q7Z5A7 132 aaPredicted RBP15.26■□□□□ 0.03
PPP4C-206ENST00000563597 CDKN2A-AS1Q9UH64 79 aa15.26■□□□□ 0.03
PPP4C-206ENST00000563597 C1orf137Q5JT78 98 aa15.25■□□□□ 0.03
PPP4C-206ENST00000563597 MRPL18Q9H0U6 180 aaKnown RBP15.24■□□□□ 0.03
PPP4C-206ENST00000563597 SLC7A5P1Q8MH63 180 aa15.23■□□□□ 0.03
PPP4C-206ENST00000563597 FABP9Q0Z7S8 132 aa15.22■□□□□ 0.03
PPP4C-206ENST00000563597 FA2HQ7L5A8 372 aa15.21■□□□□ 0.03
PPP4C-206ENST00000563597 M0QXV9 152 aa15.2■□□□□ 0.02
PPP4C-206ENST00000563597 KRTAP10-8P60410 259 aa15.2■□□□□ 0.02
PPP4C-206ENST00000563597 C9orf129Q5T035 196 aaKnown RBP15.2■□□□□ 0.02
PPP4C-206ENST00000563597 KRTAP7-1Q8IUC3 87 aa15.2■□□□□ 0.02
PPP4C-206ENST00000563597 LINC00469Q8N7U9 141 aa15.2■□□□□ 0.02
PPP4C-206ENST00000563597 SMCO4Q9NRQ5 59 aa15.2■□□□□ 0.02
PPP4C-206ENST00000563597 TINCRA0A1B0GVN0 87 aa15.19■□□□□ 0.02
PPP4C-206ENST00000563597 F8VRH5 84 aa15.18■□□□□ 0.02
PPP4C-206ENST00000563597 IGLV7-43P04211 117 aa15.18■□□□□ 0.02
PPP4C-206ENST00000563597 CXCL5P42830 114 aa15.18■□□□□ 0.02
PPP4C-206ENST00000563597 KRTAP11-1Q8IUC1 163 aa15.17■□□□□ 0.02
PPP4C-206ENST00000563597 CST9LQ9H4G1 147 aa15.17■□□□□ 0.02
PPP4C-206ENST00000563597 IGLV5-45A0A087WSX0 123 aa15.16■□□□□ 0.02
PPP4C-206ENST00000563597 SMIM1B2RUZ4 78 aa15.16■□□□□ 0.02
PPP4C-206ENST00000563597 TRAPPC1Q9Y5R8 145 aa15.16■□□□□ 0.02
PPP4C-206ENST00000563597 UBE2BP63146 152 aa15.15■□□□□ 0.02
PPP4C-206ENST00000563597 PMVKQ15126 192 aa15.15■□□□□ 0.02
PPP4C-206ENST00000563597 PDZD11Q5EBL8 140 aa15.15■□□□□ 0.02
PPP4C-206ENST00000563597 DIRC1Q969H9 104 aa15.15■□□□□ 0.02
PPP4C-206ENST00000563597 YPEL4Q96NS1 127 aa15.14■□□□□ 0.01
PPP4C-206ENST00000563597 COX7B2Q8TF08 81 aa15.12■□□□□ 0.01
PPP4C-206ENST00000563597 UBR4Q5T4S7 5183 aa15.1■□□□□ 0.01
PPP4C-206ENST00000563597 CBLN2Q8IUK8 224 aa15.1■□□□□ 0.01
PPP4C-206ENST00000563597 XAGE1AQ9HD64 81 aa15.1■□□□□ 0.01
PPP4C-206ENST00000563597 H0Y9J4 135 aa15.09■□□□□ 0.01
PPP4C-206ENST00000563597 ODF1Q14990 250 aa15.09■□□□□ 0.01
PPP4C-206ENST00000563597 C18orf32Q8TCD1 76 aa15.09■□□□□ 0.01
PPP4C-206ENST00000563597 A0A096LNJ9 63 aa15.07■□□□□ 0
PPP4C-206ENST00000563597 H3BRM9 83 aa15.07■□□□□ 0
PPP4C-206ENST00000563597 SPINK8P0C7L1 97 aa15.07■□□□□ 0
PPP4C-206ENST00000563597 LINC00614P0C842 121 aa15.07■□□□□ 0
PPP4C-206ENST00000563597 LBHQ53QV2 105 aaPredicted RBP15.06■□□□□ 0
PPP4C-206ENST00000563597 C22orf24Q9Y442 160 aa15.06■□□□□ 0
PPP4C-206ENST00000563597 URB1-AS1Q96HZ7 61 aa15.05■□□□□ -0
PPP4C-206ENST00000563597 HBDP02042 147 aa15.04■□□□□ -0
PPP4C-206ENST00000563597 TP73-AS1Q9UF72 201 aa15.04■□□□□ -0
PPP4C-206ENST00000563597 IGLC3P0DOY3 106 aa15.03■□□□□ -0
PPP4C-206ENST00000563597 NDUFA6P56556 154 aa15.02■□□□□ -0
PPP4C-206ENST00000563597 RAB5BP61020 215 aa15.02■□□□□ -0
PPP4C-206ENST00000563597 NUPR1O60356 82 aa15□□□□□ -0.01
PPP4C-206ENST00000563597 MRPL55Q7Z7F7 128 aaKnown RBP15□□□□□ -0.01
PPP4C-206ENST00000563597 IGLV5-39A0A0G2JS06 123 aa14.99□□□□□ -0.01
PPP4C-206ENST00000563597 ATP5LO75964 103 aa14.99□□□□□ -0.01
PPP4C-206ENST00000563597 PMCHL1Q16048 86 aa14.99□□□□□ -0.01
PPP4C-206ENST00000563597 PRR26Q8N8Z3 221 aa14.98□□□□□ -0.01
PPP4C-206ENST00000563597 ZNF22P17026 224 aaPredicted RBP14.97□□□□□ -0.01
PPP4C-206ENST00000563597 ZNF861PO60384 105 aa14.96□□□□□ -0.01
PPP4C-206ENST00000563597 IGLV1-50A0A075B6I6 118 aa14.95□□□□□ -0.02
PPP4C-206ENST00000563597 KRTAP1-4P0C5Y4 121 aa14.95□□□□□ -0.02
PPP4C-206ENST00000563597 LRP2P98164 4655 aa14.95□□□□□ -0.02
PPP4C-206ENST00000563597 BAGE3Q86Y29 109 aa14.93□□□□□ -0.02
PPP4C-206ENST00000563597 IGLV5-37A0A075B6J1 123 aa14.92□□□□□ -0.02
PPP4C-206ENST00000563597 LINC00167Q96N53 147 aa14.92□□□□□ -0.02
PPP4C-206ENST00000563597 TRGC2P03986 189 aa14.91□□□□□ -0.02
PPP4C-206ENST00000563597 C11orf86A6NJI1 115 aa14.9□□□□□ -0.02
PPP4C-206ENST00000563597 COLCA2A8K830 154 aa14.9□□□□□ -0.02
PPP4C-206ENST00000563597 BCE1O60756 84 aa14.9□□□□□ -0.02
PPP4C-206ENST00000563597 NKAPP1Q8N9T2 125 aa14.9□□□□□ -0.02
PPP4C-206ENST00000563597 PFN2P35080 140 aa14.89□□□□□ -0.03
PPP4C-206ENST00000563597 TMEM170BQ5T4T1 132 aa14.89□□□□□ -0.03
PPP4C-206ENST00000563597 SFTA2Q6UW10 78 aa14.89□□□□□ -0.03
PPP4C-206ENST00000563597 CHCHD1Q96BP2 118 aaKnown RBP14.89□□□□□ -0.03
PPP4C-206ENST00000563597 RPL37AP8A6NKH3 93 aa14.88□□□□□ -0.03
PPP4C-206ENST00000563597 RPL13AP40429 203 aaKnown RBP14.88□□□□□ -0.03
PPP4C-206ENST00000563597 RPL28P46779 137 aaKnown RBP14.88□□□□□ -0.03
PPP4C-206ENST00000563597 COX17Q14061 63 aa14.88□□□□□ -0.03
PPP4C-206ENST00000563597 ERG28Q9UKR5 140 aa14.88□□□□□ -0.03
PPP4C-206ENST00000563597 CHTOPQ9Y3Y2 248 aaKnown RBP14.87□□□□□ -0.03
PPP4C-206ENST00000563597 GAGE10A6NGK3 116 aa14.86□□□□□ -0.03
PPP4C-206ENST00000563597 SCO1O75880 301 aa14.85□□□□□ -0.03
PPP4C-206ENST00000563597 TRAV12-1A0A0B4J245 112 aa14.83□□□□□ -0.04
PPP4C-206ENST00000563597 IFI27L1Q96BM0 104 aa14.83□□□□□ -0.04
PPP4C-206ENST00000563597 SND1-IT1Q9HBX3 110 aa14.83□□□□□ -0.04
PPP4C-206ENST00000563597 ZNF625Q96I27 306 aaPredicted RBP14.81□□□□□ -0.04
PPP4C-206ENST00000563597 HSBP1O75506 76 aa14.79□□□□□ -0.04
PPP4C-206ENST00000563597 VPREB1P12018 145 aa14.79□□□□□ -0.04
PPP4C-206ENST00000563597 RPL24P83731 157 aaKnown RBP14.79□□□□□ -0.04
PPP4C-206ENST00000563597 FAM19A2Q8N3H0 131 aa14.78□□□□□ -0.04
PPP4C-206ENST00000563597 IGKV2-28A0A075B6P5 120 aa14.77□□□□□ -0.05
PPP4C-206ENST00000563597 TMEM223A0PJW6 202 aa14.77□□□□□ -0.05
PPP4C-206ENST00000563597 IGKV2D-28P01615 120 aa14.77□□□□□ -0.05
PPP4C-206ENST00000563597 SERF1AO75920 110 aa14.76□□□□□ -0.05
PPP4C-206ENST00000563597 UBE2AP49459 152 aa14.76□□□□□ -0.05
PPP4C-206ENST00000563597 LINC00310P59036 64 aa14.76□□□□□ -0.05
PPP4C-206ENST00000563597 KRTAP13-1Q8IUC0 172 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms