RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.18
SF3B3-202ENST00000562722 F8VRH5 84 aa7.7□□□□□ -1.18
SF3B3-202ENST00000562722 HERVK_113P63121 156 aa7.7□□□□□ -1.18
SF3B3-202ENST00000562722 SEC11AP67812 179 aa7.7□□□□□ -1.18
SF3B3-202ENST00000562722 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
SF3B3-202ENST00000562722 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
SF3B3-202ENST00000562722 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
SF3B3-202ENST00000562722 BCE1O60756 84 aa7.69□□□□□ -1.18
SF3B3-202ENST00000562722 NPSP0C0P6 89 aa7.69□□□□□ -1.18
SF3B3-202ENST00000562722 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
SF3B3-202ENST00000562722 IGIPA6NJ69 53 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 RPL37AP8A6NKH3 93 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 K7EMI3 77 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 CRYGAP11844 174 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 CXCL5P42830 114 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 FAM19A3Q7Z5A8 133 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
SF3B3-202ENST00000562722 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
SF3B3-202ENST00000562722 A0A087X002 238 aa7.67□□□□□ -1.18
SF3B3-202ENST00000562722 GAGE10A6NGK3 116 aa7.67□□□□□ -1.18
SF3B3-202ENST00000562722 MT-ND4LP03901 98 aa7.67□□□□□ -1.18
SF3B3-202ENST00000562722 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
SF3B3-202ENST00000562722 G0S2P27469 103 aa7.66□□□□□ -1.18
SF3B3-202ENST00000562722 ANAPC16Q96DE5 110 aa7.66□□□□□ -1.18
SF3B3-202ENST00000562722 A0A1B0GVG6 124 aa7.65□□□□□ -1.18
SF3B3-202ENST00000562722 UBE2AP49459 152 aa7.65□□□□□ -1.18
SF3B3-202ENST00000562722 PNRC1Q12796 327 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-202ENST00000562722 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
SF3B3-202ENST00000562722 TIMM17AQ99595 171 aa7.65□□□□□ -1.18
SF3B3-202ENST00000562722 RAB5BP61020 215 aa7.64□□□□□ -1.19
SF3B3-202ENST00000562722 NKAPP1Q8N9T2 125 aa7.64□□□□□ -1.19
SF3B3-202ENST00000562722 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
SF3B3-202ENST00000562722 TOMM6Q96B49 74 aa7.64□□□□□ -1.19
SF3B3-202ENST00000562722 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
SF3B3-202ENST00000562722 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
SF3B3-202ENST00000562722 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
SF3B3-202ENST00000562722 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
SF3B3-202ENST00000562722 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
SF3B3-202ENST00000562722 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
SF3B3-202ENST00000562722 TINCRA0A1B0GVN0 87 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 KIAA1644Q3SXP7 199 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 ERASQ7Z444 233 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
SF3B3-202ENST00000562722 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
SF3B3-202ENST00000562722 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
SF3B3-202ENST00000562722 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
SF3B3-202ENST00000562722 ATP5LO75964 103 aa7.59□□□□□ -1.19
SF3B3-202ENST00000562722 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
SF3B3-202ENST00000562722 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
SF3B3-202ENST00000562722 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
SF3B3-202ENST00000562722 IGLV5-45A0A087WSX0 123 aa7.58□□□□□ -1.2
SF3B3-202ENST00000562722 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
SF3B3-202ENST00000562722 SCO1O75880 301 aa7.58□□□□□ -1.2
SF3B3-202ENST00000562722 RAB14P61106 215 aa7.58□□□□□ -1.2
SF3B3-202ENST00000562722 H3BRM9 83 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 PFN2P35080 140 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 PRLHP81277 87 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 FAM229BQ4G0N7 80 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 CDIP1Q9H305 208 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 CST9LQ9H4G1 147 aa7.57□□□□□ -1.2
SF3B3-202ENST00000562722 LINC01549A6NIU2 74 aa7.56□□□□□ -1.2
SF3B3-202ENST00000562722 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
SF3B3-202ENST00000562722 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
SF3B3-202ENST00000562722 PMVKQ15126 192 aa7.55□□□□□ -1.2
SF3B3-202ENST00000562722 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
SF3B3-202ENST00000562722 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
SF3B3-202ENST00000562722 FA2HQ7L5A8 372 aa7.54□□□□□ -1.2
SF3B3-202ENST00000562722 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
SF3B3-202ENST00000562722 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
SF3B3-202ENST00000562722 NDUFA6P56556 154 aa7.53□□□□□ -1.2
SF3B3-202ENST00000562722 TMEM126AQ9H061 195 aa7.53□□□□□ -1.2
SF3B3-202ENST00000562722 S100PP25815 95 aa7.52□□□□□ -1.21
SF3B3-202ENST00000562722 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
SF3B3-202ENST00000562722 SND1-IT1Q9HBX3 110 aa7.52□□□□□ -1.21
SF3B3-202ENST00000562722 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
SF3B3-202ENST00000562722 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
SF3B3-202ENST00000562722 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
SF3B3-202ENST00000562722 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
SF3B3-202ENST00000562722 VPREB1P12018 145 aa7.5□□□□□ -1.21
SF3B3-202ENST00000562722 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-202ENST00000562722 CBLN2Q8IUK8 224 aa7.5□□□□□ -1.21
SF3B3-202ENST00000562722 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-202ENST00000562722 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
SF3B3-202ENST00000562722 M0R378 163 aa7.49□□□□□ -1.21
SF3B3-202ENST00000562722 IGLC3P0DOY3 106 aa7.49□□□□□ -1.21
SF3B3-202ENST00000562722 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
SF3B3-202ENST00000562722 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
SF3B3-202ENST00000562722 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
SF3B3-202ENST00000562722 FABP9Q0Z7S8 132 aa7.48□□□□□ -1.21
SF3B3-202ENST00000562722 COX17Q14061 63 aa7.48□□□□□ -1.21
SF3B3-202ENST00000562722 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
SF3B3-202ENST00000562722 ZNF22P17026 224 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-202ENST00000562722 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
SF3B3-202ENST00000562722 CTAG1AP78358 180 aa7.46□□□□□ -1.22
SF3B3-202ENST00000562722 COX19Q49B96 90 aa7.46□□□□□ -1.22
SF3B3-202ENST00000562722 TMEM218A2RU14 115 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms