RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PKHD1P08F94 4074 aa14.88□□□□□ -0.03
SYNGR3-202ENST00000562045 TOMM7Q9P0U1 55 aa14.88□□□□□ -0.03
SYNGR3-202ENST00000562045 A0A1B0GVY2 172 aa14.87□□□□□ -0.03
SYNGR3-202ENST00000562045 NDUFA12Q9UI09 145 aa14.87□□□□□ -0.03
SYNGR3-202ENST00000562045 ORAOV1Q8WV07 137 aa14.86□□□□□ -0.03
SYNGR3-202ENST00000562045 PRSS2P07478 247 aa14.86□□□□□ -0.03
SYNGR3-202ENST00000562045 Q8IZM0 81 aa14.86□□□□□ -0.03
SYNGR3-202ENST00000562045 TM2D2Q9BX73 214 aa14.86□□□□□ -0.03
SYNGR3-202ENST00000562045 HNRNPA3P51991 378 aaKnown RBP14.84□□□□□ -0.03
SYNGR3-202ENST00000562045 NDUFA1O15239 70 aa14.83□□□□□ -0.03
SYNGR3-202ENST00000562045 C6orf226Q5I0X4 101 aa14.83□□□□□ -0.03
SYNGR3-202ENST00000562045 SCGB1D4Q6XE38 83 aa14.83□□□□□ -0.03
SYNGR3-202ENST00000562045 SPAG11BQ08648 103 aa14.81□□□□□ -0.04
SYNGR3-202ENST00000562045 CFAP161Q6P656 301 aa14.81□□□□□ -0.04
SYNGR3-202ENST00000562045 SFTA2Q6UW10 78 aa14.81□□□□□ -0.04
SYNGR3-202ENST00000562045 ZNF625Q96I27 306 aaPredicted RBP14.81□□□□□ -0.04
SYNGR3-202ENST00000562045 C2orf91Q6ZV80 131 aa14.8□□□□□ -0.04
SYNGR3-202ENST00000562045 EREGO14944 169 aa14.8□□□□□ -0.04
SYNGR3-202ENST00000562045 CXCL5P42830 114 aa14.8□□□□□ -0.04
SYNGR3-202ENST00000562045 KIAA0087Q14695 138 aa14.8□□□□□ -0.04
SYNGR3-202ENST00000562045 HIGD1BQ9P298 99 aa14.8□□□□□ -0.04
SYNGR3-202ENST00000562045 M0R143 59 aa14.79□□□□□ -0.04
SYNGR3-202ENST00000562045 HERV-K104P63124 156 aa14.79□□□□□ -0.04
SYNGR3-202ENST00000562045 CKS1BP61024 79 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 C15orf56Q8N910 161 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 SNHG12Q9BXW3 62 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 DNAH5Q8TE73 4624 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 A0A0J9YXY3 114 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 LRCOL1A6NCL2 159 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 PSCAO43653 123 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 WFDC2Q14508 124 aa14.78□□□□□ -0.04
SYNGR3-202ENST00000562045 ZNF561-AS1K7EIQ3 104 aa14.77□□□□□ -0.05
SYNGR3-202ENST00000562045 A0A087WTM6 91 aa14.76□□□□□ -0.05
SYNGR3-202ENST00000562045 FUSP35637 526 aaKnown RBP eCLIP14.76□□□□□ -0.05
SYNGR3-202ENST00000562045 GVQW2A0A096LPI5 108 aaPredicted RBP14.75□□□□□ -0.05
SYNGR3-202ENST00000562045 DYNC1H1Q14204 4646 aaKnown RBP14.75□□□□□ -0.05
SYNGR3-202ENST00000562045 BIRC6Q9NR09 4857 aa14.75□□□□□ -0.05
SYNGR3-202ENST00000562045 HIGD2BQ4VC39 106 aa14.75□□□□□ -0.05
SYNGR3-202ENST00000562045 LECT2O14960 151 aa14.74□□□□□ -0.05
SYNGR3-202ENST00000562045 KRTAP10-2P60368 255 aa14.74□□□□□ -0.05
SYNGR3-202ENST00000562045 C2orf82Q6UX34 121 aa14.74□□□□□ -0.05
SYNGR3-202ENST00000562045 USP17L23D6RBM5 183 aa14.73□□□□□ -0.05
SYNGR3-202ENST00000562045 NTN5Q8WTR8 489 aaPredicted RBP14.73□□□□□ -0.05
SYNGR3-202ENST00000562045 TMEM238C9JI98 176 aa14.72□□□□□ -0.05
SYNGR3-202ENST00000562045 CIRBPQ14011 172 aaKnown RBP14.72□□□□□ -0.05
SYNGR3-202ENST00000562045 MEIG1Q5JSS6 88 aa14.72□□□□□ -0.05
SYNGR3-202ENST00000562045 LINC00526Q96FQ7 95 aa14.72□□□□□ -0.05
SYNGR3-202ENST00000562045 TIMM17BO60830 172 aa14.71□□□□□ -0.05
SYNGR3-202ENST00000562045 C2orf48Q96LS8 159 aa14.71□□□□□ -0.05
SYNGR3-202ENST00000562045 F8WDY8 70 aa14.7□□□□□ -0.06
SYNGR3-202ENST00000562045 SPANXB1Q9NS25 103 aaPredicted RBP14.7□□□□□ -0.06
SYNGR3-202ENST00000562045 HSD52Q0P140 79 aa14.69□□□□□ -0.06
SYNGR3-202ENST00000562045 CAMK2N2Q96S95 79 aa14.69□□□□□ -0.06
SYNGR3-202ENST00000562045 SRSF9Q13242 221 aaKnown RBP eCLIP14.68□□□□□ -0.06
SYNGR3-202ENST00000562045 HIST1H4GQ99525 98 aa14.68□□□□□ -0.06
SYNGR3-202ENST00000562045 LITAFQ99732 161 aa14.68□□□□□ -0.06
SYNGR3-202ENST00000562045 TAL2Q16559 108 aa14.67□□□□□ -0.06
SYNGR3-202ENST00000562045 UNQ6190/PRO20217Q6UXQ8 127 aa14.67□□□□□ -0.06
SYNGR3-202ENST00000562045 ERG28Q9UKR5 140 aa14.66□□□□□ -0.06
SYNGR3-202ENST00000562045 C10orf25Q5T742 122 aa14.66□□□□□ -0.06
SYNGR3-202ENST00000562045 Q8N814 137 aa14.66□□□□□ -0.06
SYNGR3-202ENST00000562045 LRP1BQ9NZR2 4599 aa14.65□□□□□ -0.06
SYNGR3-202ENST00000562045 SMIM13P0DJ93 91 aa14.65□□□□□ -0.06
SYNGR3-202ENST00000562045 C14orf177Q52M58 125 aa14.65□□□□□ -0.06
SYNGR3-202ENST00000562045 Q6ZVH6 145 aa14.65□□□□□ -0.06
SYNGR3-202ENST00000562045 TRBV30A0A0K0K1B3 111 aa14.64□□□□□ -0.07
SYNGR3-202ENST00000562045 ADAMTSL4-AS1Q5T5F5 129 aa14.64□□□□□ -0.07
SYNGR3-202ENST00000562045 SPANXDQ9BXN6 97 aa14.64□□□□□ -0.07
SYNGR3-202ENST00000562045 SPANXCQ9NY87 97 aa14.64□□□□□ -0.07
SYNGR3-202ENST00000562045 A0A0U1RRA0 63 aa14.63□□□□□ -0.07
SYNGR3-202ENST00000562045 COX17Q14061 63 aa14.63□□□□□ -0.07
SYNGR3-202ENST00000562045 LINC00158P58513 81 aa14.63□□□□□ -0.07
SYNGR3-202ENST00000562045 SYCNQ0VAF6 134 aa14.63□□□□□ -0.07
SYNGR3-202ENST00000562045 Q6ZRU5 148 aa14.63□□□□□ -0.07
SYNGR3-202ENST00000562045 PFN2P35080 140 aa14.62□□□□□ -0.07
SYNGR3-202ENST00000562045 C6orf48Q9UBA6 75 aa14.62□□□□□ -0.07
SYNGR3-202ENST00000562045 HINT1P49773 126 aaPredicted RBP14.61□□□□□ -0.07
SYNGR3-202ENST00000562045 CEND1Q8N111 149 aa14.61□□□□□ -0.07
SYNGR3-202ENST00000562045 GCSHP23434 173 aa14.61□□□□□ -0.07
SYNGR3-202ENST00000562045 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.6□□□□□ -0.07
SYNGR3-202ENST00000562045 C9orf116Q5BN46 136 aaPredicted RBP14.6□□□□□ -0.07
SYNGR3-202ENST00000562045 DAND5Q8N907 189 aa14.6□□□□□ -0.07
SYNGR3-202ENST00000562045 BVES-AS1Q5T3Y7 98 aa14.59□□□□□ -0.07
SYNGR3-202ENST00000562045 MIR7-3HGQ8N6C7 128 aa14.59□□□□□ -0.07
SYNGR3-202ENST00000562045 CARD19Q96LW7 228 aa14.59□□□□□ -0.07
SYNGR3-202ENST00000562045 C16orf90A8MZG2 172 aa14.58□□□□□ -0.07
SYNGR3-202ENST00000562045 IFITM1P13164 125 aa14.58□□□□□ -0.08
SYNGR3-202ENST00000562045 COPS9Q8WXC6 57 aa14.58□□□□□ -0.08
SYNGR3-202ENST00000562045 SLPIP03973 132 aa14.57□□□□□ -0.08
SYNGR3-202ENST00000562045 KIAA1109Q2LD37 5005 aa14.56□□□□□ -0.08
SYNGR3-202ENST00000562045 PTTG1IPP53801 180 aa14.56□□□□□ -0.08
SYNGR3-202ENST00000562045 RNF151Q2KHN1 245 aa14.56□□□□□ -0.08
SYNGR3-202ENST00000562045 MUSTN1Q8IVN3 82 aa14.56□□□□□ -0.08
SYNGR3-202ENST00000562045 PGPEP1Q9NXJ5 209 aa14.56□□□□□ -0.08
SYNGR3-202ENST00000562045 BATFQ16520 125 aa14.55□□□□□ -0.08
SYNGR3-202ENST00000562045 NPC2P61916 151 aa14.55□□□□□ -0.08
SYNGR3-202ENST00000562045 CNBPP62633 177 aaKnown RBP14.55□□□□□ -0.08
SYNGR3-202ENST00000562045 LINC00308Q8TCZ7 52 aa14.55□□□□□ -0.08
SYNGR3-202ENST00000562045 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.54□□□□□ -0.08
SYNGR3-202ENST00000562045 FXYD2P54710 66 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms