RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
AC055717.2-201ENST00000561864 TRIAP1O43715 76 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 COX6CP09669 75 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 LINC00158P58513 81 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 FOXI1Q12951 378 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 ATXN8Q156A1 80 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 TM2D3Q9BRN9 247 aa8.62□□□□□ -1.03
AC055717.2-201ENST00000561864 M0QXV9 152 aa8.61□□□□□ -1.03
AC055717.2-201ENST00000561864 MALP21145 153 aa8.61□□□□□ -1.03
AC055717.2-201ENST00000561864 CKS1BP61024 79 aa8.61□□□□□ -1.03
AC055717.2-201ENST00000561864 WFDC2Q14508 124 aa8.61□□□□□ -1.03
AC055717.2-201ENST00000561864 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
AC055717.2-201ENST00000561864 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
AC055717.2-201ENST00000561864 CRPP02741 224 aa8.6□□□□□ -1.03
AC055717.2-201ENST00000561864 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
AC055717.2-201ENST00000561864 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
AC055717.2-201ENST00000561864 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 GAGE12HA6NDE8 117 aa8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 K7EIL1 84 aa8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 KLK5Q9Y337 293 aaPredicted RBP8.59□□□□□ -1.03
AC055717.2-201ENST00000561864 TRRAPQ9Y4A5 3859 aa8.58□□□□□ -1.04
AC055717.2-201ENST00000561864 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
AC055717.2-201ENST00000561864 COX17Q14061 63 aa8.58□□□□□ -1.04
AC055717.2-201ENST00000561864 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
AC055717.2-201ENST00000561864 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
AC055717.2-201ENST00000561864 PFN2P35080 140 aa8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 CCL18P55774 89 aa8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 MTURNQ8N3F0 131 aa8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
AC055717.2-201ENST00000561864 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 J3QR89 54 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
AC055717.2-201ENST00000561864 ESRGQ1W209 222 aa8.55□□□□□ -1.04
AC055717.2-201ENST00000561864 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
AC055717.2-201ENST00000561864 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
AC055717.2-201ENST00000561864 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
AC055717.2-201ENST00000561864 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
AC055717.2-201ENST00000561864 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 C9JAW5 83 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 LST1O00453 97 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 SLC25A20O43772 301 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 PRB2P02812 416 aaPredicted RBP8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
AC055717.2-201ENST00000561864 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
AC055717.2-201ENST00000561864 TRBV10-2A0A0K0K1G8 114 aa8.53□□□□□ -1.04
AC055717.2-201ENST00000561864 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
AC055717.2-201ENST00000561864 DEFB121Q5J5C9 76 aa8.53□□□□□ -1.04
AC055717.2-201ENST00000561864 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
AC055717.2-201ENST00000561864 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
AC055717.2-201ENST00000561864 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
AC055717.2-201ENST00000561864 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
AC055717.2-201ENST00000561864 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 H3BT86 120 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 NDUFC2O95298 119 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 ANKRD29Q8N6D5 301 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 PPDPFLQ8WWR9 84 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 CLEC2BQ92478 149 aa8.51□□□□□ -1.05
AC055717.2-201ENST00000561864 KRTAP26-1Q6PEX3 210 aa8.5□□□□□ -1.05
AC055717.2-201ENST00000561864 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
AC055717.2-201ENST00000561864 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
AC055717.2-201ENST00000561864 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
AC055717.2-201ENST00000561864 F8WDY8 70 aa8.48□□□□□ -1.05
AC055717.2-201ENST00000561864 TRACP01848 142 aa8.48□□□□□ -1.05
AC055717.2-201ENST00000561864 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
AC055717.2-201ENST00000561864 UNQ6190/PRO20217Q6UXQ8 127 aa8.47□□□□□ -1.05
AC055717.2-201ENST00000561864 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
AC055717.2-201ENST00000561864 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
AC055717.2-201ENST00000561864 SMIM11BQ8TCY0 68 aa8.46□□□□□ -1.06
AC055717.2-201ENST00000561864 C2orf48Q96LS8 159 aa8.46□□□□□ -1.06
AC055717.2-201ENST00000561864 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 H0YGX0 51 aa8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 ZNF561-AS1K7EIQ3 104 aa8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
AC055717.2-201ENST00000561864 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
AC055717.2-201ENST00000561864 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
AC055717.2-201ENST00000561864 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
AC055717.2-201ENST00000561864 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
AC055717.2-201ENST00000561864 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
AC055717.2-201ENST00000561864 B9D2Q9BPU9 175 aa8.43□□□□□ -1.06
AC055717.2-201ENST00000561864 IGKV2D-24A0A075B6R9 120 aa8.42□□□□□ -1.06
AC055717.2-201ENST00000561864 RMI2Q96E14 147 aa8.42□□□□□ -1.06
AC055717.2-201ENST00000561864 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
AC055717.2-201ENST00000561864 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
AC055717.2-201ENST00000561864 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms