RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 NPYP01303 97 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 IGLV1-51P01701 117 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 IGLC2P0DOY2 106 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 IGLC3P0DOY3 106 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 FXYD7P58549 80 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 WT1-ASQ06250 92 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 ADIRFQ15847 76 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 ATP11AUNQ6ZP68 121 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 C5orf38Q86SI9 138 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 VSTM2AQ8TAG5 236 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 TSKUQ8WUA8 353 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 IMMP2LQ96T52 175 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 LINC00467Q9BRT7 94 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 TTTY13Q9BZ97 58 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 DPH3P1Q9H4G8 78 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 ZNF355PQ9NSJ1 428 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 LY96Q9Y6Y9 160 aa2.61□□□□□ -1.99
LRRC28-222ENST00000561431 UBE2L5PA0A1B0GUS4 154 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 A8MWP4 228 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 H3BRM9 83 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 TIMM17BO60830 172 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 CBLN1P23435 193 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 RPS10P46783 165 aaKnown RBP2.6□□□□□ -1.99
LRRC28-222ENST00000561431 UBE2L3P68036 154 aaKnown RBP2.6□□□□□ -1.99
LRRC28-222ENST00000561431 SS18Q15532 418 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 MIAQ16674 131 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 DEFB121Q5J5C9 76 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 NTM-AS1Q6ZSK4 140 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
LRRC28-222ENST00000561431 OR2T35Q8NGX2 323 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 SMIM4Q8WVI0 70 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 C20orf78Q9BR46 151 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 NDUFA4L2Q9NRX3 87 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 TMEM14BQ9NUH8 114 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 CACFD1Q9UGQ2 172 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 S4R3C0 116 aa2.6□□□□□ -1.99
LRRC28-222ENST00000561431 TRAV14DV4A0A0A6YYC5 116 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 K7EIM0 57 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 LECT2O14960 151 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 SLC25A20O43772 301 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 TLX1NBP0CAT3 122 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 SSBP1Q04837 148 aaKnown RBP2.59□□□□□ -1.99
LRRC28-222ENST00000561431 CIRBPQ14011 172 aaKnown RBP2.59□□□□□ -1.99
LRRC28-222ENST00000561431 Q8N8P6 123 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 Q8N976 141 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 SMCR5Q8TEV8 140 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 PMCHL2Q9BQD1 86 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 SPCS1Q9Y6A9 102 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 V9GYH0 126 aa2.59□□□□□ -1.99
LRRC28-222ENST00000561431 NBEAL2Q6ZNJ1 2754 aa2.59□□□□□ -2
LRRC28-222ENST00000561431 TRBV24-1A0A075B6N3 115 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 TRBV7-1A0A0A6YYK4 115 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 CRYM-AS1A6NIL9 109 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 I3L2K1 104 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 ATOX1O00244 68 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 NUPR1O60356 82 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 SH2D1AO60880 128 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 IGKCP01834 107 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 DEFA4P12838 97 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 ADCYAP1P18509 176 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 HINT1P49773 126 aaPredicted RBP2.58□□□□□ -2
LRRC28-222ENST00000561431 SUPT4H1P63272 117 aaKnown RBP2.58□□□□□ -2
LRRC28-222ENST00000561431 PRCDQ00LT1 54 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 DEFB114Q30KQ6 69 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 SPINK9Q5DT21 86 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 LINC00322Q6ZN03 302 aaPredicted RBP2.58□□□□□ -2
LRRC28-222ENST00000561431 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 CIRBP-AS1Q8TBR5 109 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 PPDPFLQ8WWR9 84 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 WFDC10AQ9H1F0 79 aa2.58□□□□□ -2
LRRC28-222ENST00000561431 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 TRAV1-1A0A0B4J248 108 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 A0A1W2PPM0 123 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 IBA57-AS1B1ANH7 110 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 PANO1I0J062 215 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 LYRM1O43325 122 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 IL5P05113 134 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 CTSGP08311 255 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 RNASE2P10153 161 aaKnown RBP2.57□□□□□ -2
LRRC28-222ENST00000561431 CKS2P33552 79 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 SDIM1Q6ZPB5 146 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 OR10AG1Q8NH19 301 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 SMDT1Q9H4I9 107 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 MRPL36Q9P0J6 103 aaKnown RBP2.57□□□□□ -2
LRRC28-222ENST00000561431 U3KQK5 164 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
LRRC28-222ENST00000561431 TNCP24821 2201 aa2.57□□□□□ -2
LRRC28-222ENST00000561431 IGHV3OR16-8A0A075B7F1 116 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 NDUFA4O00483 81 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 ZNF705BP0CI00 300 aaPredicted RBP2.56□□□□□ -2
LRRC28-222ENST00000561431 NMSQ5H8A3 153 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 Q8NDZ9 215 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 DYNLRB2Q8TF09 96 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 CHCHD1Q96BP2 118 aaKnown RBP2.56□□□□□ -2
LRRC28-222ENST00000561431 RETNLBQ9BQ08 111 aa2.56□□□□□ -2
LRRC28-222ENST00000561431 NHP2Q9NX24 153 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms