RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CKS1BP61024 79 aa12.54□□□□□ -0.4
TSPAN3-210ENST00000561277 C6orf226Q5I0X4 101 aa12.54□□□□□ -0.4
TSPAN3-210ENST00000561277 Q8IZM0 81 aa12.54□□□□□ -0.4
TSPAN3-210ENST00000561277 IGLV5-45A0A087WSX0 123 aa12.53□□□□□ -0.4
TSPAN3-210ENST00000561277 SMIM1B2RUZ4 78 aa12.53□□□□□ -0.4
TSPAN3-210ENST00000561277 SCO1O75880 301 aa12.53□□□□□ -0.4
TSPAN3-210ENST00000561277 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
TSPAN3-210ENST00000561277 TRBV30A0A0K0K1B3 111 aa12.52□□□□□ -0.41
TSPAN3-210ENST00000561277 SPINK8P0C7L1 97 aa12.52□□□□□ -0.41
TSPAN3-210ENST00000561277 Q6ZRP5 223 aa12.52□□□□□ -0.41
TSPAN3-210ENST00000561277 HSBP1O75506 76 aa12.51□□□□□ -0.41
TSPAN3-210ENST00000561277 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
TSPAN3-210ENST00000561277 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
TSPAN3-210ENST00000561277 TLX1NBP0CAT3 122 aa12.5□□□□□ -0.41
TSPAN3-210ENST00000561277 IGLC3P0DOY3 106 aa12.5□□□□□ -0.41
TSPAN3-210ENST00000561277 GAGE2EQ4V326 116 aa12.5□□□□□ -0.41
TSPAN3-210ENST00000561277 GAGE2DQ9UEU5 116 aa12.5□□□□□ -0.41
TSPAN3-210ENST00000561277 FAM19A2Q8N3H0 131 aa12.49□□□□□ -0.41
TSPAN3-210ENST00000561277 H3BRM9 83 aa12.48□□□□□ -0.41
TSPAN3-210ENST00000561277 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
TSPAN3-210ENST00000561277 NDUFC2-KCTD14E9PQ53 114 aa12.47□□□□□ -0.41
TSPAN3-210ENST00000561277 F8VRH5 84 aa12.47□□□□□ -0.41
TSPAN3-210ENST00000561277 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
TSPAN3-210ENST00000561277 IFI27L1Q96BM0 104 aa12.47□□□□□ -0.41
TSPAN3-210ENST00000561277 SERF1AO75920 110 aa12.46□□□□□ -0.42
TSPAN3-210ENST00000561277 ZNF22P17026 224 aaPredicted RBP12.46□□□□□ -0.42
TSPAN3-210ENST00000561277 CXCL5P42830 114 aa12.46□□□□□ -0.42
TSPAN3-210ENST00000561277 LINC00310P59036 64 aa12.45□□□□□ -0.42
TSPAN3-210ENST00000561277 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
TSPAN3-210ENST00000561277 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
TSPAN3-210ENST00000561277 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
TSPAN3-210ENST00000561277 TMEM170BQ5T4T1 132 aa12.43□□□□□ -0.42
TSPAN3-210ENST00000561277 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
TSPAN3-210ENST00000561277 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
TSPAN3-210ENST00000561277 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
TSPAN3-210ENST00000561277 H0Y8G0 127 aa12.41□□□□□ -0.42
TSPAN3-210ENST00000561277 PHF5AQ7RTV0 110 aaKnown RBP12.41□□□□□ -0.42
TSPAN3-210ENST00000561277 NUPR1O60356 82 aa12.4□□□□□ -0.42
TSPAN3-210ENST00000561277 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
TSPAN3-210ENST00000561277 LEPROTL1O95214 131 aa12.39□□□□□ -0.43
TSPAN3-210ENST00000561277 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
TSPAN3-210ENST00000561277 PKHD1L1Q86WI1 4243 aa12.39□□□□□ -0.43
TSPAN3-210ENST00000561277 XAGE1AQ9HD64 81 aa12.39□□□□□ -0.43
TSPAN3-210ENST00000561277 DMBT1Q9UGM3 2413 aaPredicted RBP12.38□□□□□ -0.43
TSPAN3-210ENST00000561277 J3QL48 77 aa12.37□□□□□ -0.43
TSPAN3-210ENST00000561277 FABP4P15090 132 aa12.36□□□□□ -0.43
TSPAN3-210ENST00000561277 KRTAP7-1Q8IUC3 87 aa12.36□□□□□ -0.43
TSPAN3-210ENST00000561277 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 M0QXV9 152 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
TSPAN3-210ENST00000561277 ODF1Q14990 250 aa12.34□□□□□ -0.43
TSPAN3-210ENST00000561277 HERC1Q15751 4861 aa12.33□□□□□ -0.44
TSPAN3-210ENST00000561277 PSORS1C2Q9UIG4 136 aa12.33□□□□□ -0.44
TSPAN3-210ENST00000561277 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
TSPAN3-210ENST00000561277 SERTAD4-AS1Q5TG53 156 aa12.32□□□□□ -0.44
TSPAN3-210ENST00000561277 ZNF625Q96I27 306 aaPredicted RBP12.31□□□□□ -0.44
TSPAN3-210ENST00000561277 PFN2P35080 140 aa12.3□□□□□ -0.44
TSPAN3-210ENST00000561277 UBE2BP63146 152 aa12.3□□□□□ -0.44
TSPAN3-210ENST00000561277 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
TSPAN3-210ENST00000561277 KRTAP11-1Q8IUC1 163 aa12.3□□□□□ -0.44
TSPAN3-210ENST00000561277 OXTP01178 125 aa12.29□□□□□ -0.44
TSPAN3-210ENST00000561277 C1orf137Q5JT78 98 aa12.29□□□□□ -0.44
TSPAN3-210ENST00000561277 PMCHL2Q9BQD1 86 aa12.29□□□□□ -0.44
TSPAN3-210ENST00000561277 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
TSPAN3-210ENST00000561277 SFTA2Q6UW10 78 aa12.26□□□□□ -0.45
TSPAN3-210ENST00000561277 C22orf24Q9Y442 160 aa12.26□□□□□ -0.45
TSPAN3-210ENST00000561277 PLNP26678 52 aa12.26□□□□□ -0.45
TSPAN3-210ENST00000561277 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
TSPAN3-210ENST00000561277 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
TSPAN3-210ENST00000561277 ATP6V1G1O75348 118 aa12.24□□□□□ -0.45
TSPAN3-210ENST00000561277 S100A1P23297 94 aa12.24□□□□□ -0.45
TSPAN3-210ENST00000561277 DPM2O94777 84 aa12.23□□□□□ -0.45
TSPAN3-210ENST00000561277 SRSF9Q13242 221 aaKnown RBP eCLIP12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 COX17Q14061 63 aa12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 LBHQ53QV2 105 aaPredicted RBP12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 IGKCP01834 107 aa12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
TSPAN3-210ENST00000561277 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.46
TSPAN3-210ENST00000561277 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
TSPAN3-210ENST00000561277 IGLV7-43P04211 117 aa12.2□□□□□ -0.46
TSPAN3-210ENST00000561277 LINC00158P58513 81 aa12.2□□□□□ -0.46
TSPAN3-210ENST00000561277 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
TSPAN3-210ENST00000561277 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
TSPAN3-210ENST00000561277 NKAPP1Q8N9T2 125 aa12.19□□□□□ -0.46
TSPAN3-210ENST00000561277 NDUFA12Q9UI09 145 aa12.19□□□□□ -0.46
TSPAN3-210ENST00000561277 SYS1-DBNDD2H3BUS1 97 aa12.18□□□□□ -0.46
TSPAN3-210ENST00000561277 TSPEAR-AS2P59090 65 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms