RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MTORP42345 2549 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 TRBV10-3A0A0K0K1G6 114 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 RS1O15537 224 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 Q9UF83 564 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 SERP1Q9Y6X1 66 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 CUBNO60494 3623 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
RABGGTA-220ENST00000560998 A0A087WYN8 130 aa9.87□□□□□ -0.83
RABGGTA-220ENST00000560998 GHRHP01286 108 aa9.87□□□□□ -0.83
RABGGTA-220ENST00000560998 CCKP06307 115 aa9.87□□□□□ -0.83
RABGGTA-220ENST00000560998 IL17DQ8TAD2 202 aa9.87□□□□□ -0.83
RABGGTA-220ENST00000560998 SETD2Q9BYW2 2564 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-220ENST00000560998 PFN2P35080 140 aa9.86□□□□□ -0.83
RABGGTA-220ENST00000560998 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-220ENST00000560998 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
RABGGTA-220ENST00000560998 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
RABGGTA-220ENST00000560998 IGLV1-51P01701 117 aa9.85□□□□□ -0.83
RABGGTA-220ENST00000560998 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
RABGGTA-220ENST00000560998 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 SMR3AQ99954 134 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 SND1-IT1Q9HBX3 110 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 IGKV2-28A0A075B6P5 120 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 JMJD7-PLA2G4BH0Y9G9 81 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 IGKV2D-28P01615 120 aa9.84□□□□□ -0.83
RABGGTA-220ENST00000560998 SETXQ7Z333 2677 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-220ENST00000560998 ORMDL1Q9P0S3 153 aa9.83□□□□□ -0.84
RABGGTA-220ENST00000560998 FASNP49327 2511 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-220ENST00000560998 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-220ENST00000560998 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
RABGGTA-220ENST00000560998 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
RABGGTA-220ENST00000560998 TRGV1A0A0A0MS02 117 aa9.82□□□□□ -0.84
RABGGTA-220ENST00000560998 WFDC10AQ9H1F0 79 aa9.82□□□□□ -0.84
RABGGTA-220ENST00000560998 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 NCR3O14931 201 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 LECT2O14960 151 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 XCL1P47992 114 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 LINC00167Q96N53 147 aa9.81□□□□□ -0.84
RABGGTA-220ENST00000560998 Q6ZTI0 123 aa9.8□□□□□ -0.84
RABGGTA-220ENST00000560998 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-220ENST00000560998 LY6G6DO95868 133 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 KRTAP10-3P60369 221 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 HIVEP2P31629 2446 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 JMJD1CQ15652 2540 aa9.79□□□□□ -0.84
RABGGTA-220ENST00000560998 TRAV7A0A075B6U4 112 aa9.78□□□□□ -0.84
RABGGTA-220ENST00000560998 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.84
RABGGTA-220ENST00000560998 SS18Q15532 418 aa9.77□□□□□ -0.84
RABGGTA-220ENST00000560998 UBL5Q9BZL1 73 aa9.77□□□□□ -0.84
RABGGTA-220ENST00000560998 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.84
RABGGTA-220ENST00000560998 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.84
RABGGTA-220ENST00000560998 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 PLAC8L1A1L4L8 177 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 H7BZZ5 65 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 KLKP1Q107X0 134 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
RABGGTA-220ENST00000560998 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
RABGGTA-220ENST00000560998 F8WDY8 70 aa9.76□□□□□ -0.85
RABGGTA-220ENST00000560998 K7EQD1 137 aa9.76□□□□□ -0.85
RABGGTA-220ENST00000560998 CCL18P55774 89 aa9.75□□□□□ -0.85
RABGGTA-220ENST00000560998 HECTD1Q9ULT8 2610 aa9.75□□□□□ -0.85
RABGGTA-220ENST00000560998 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-220ENST00000560998 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
RABGGTA-220ENST00000560998 TMEM256-PLSCR3K7ERE1 68 aa9.74□□□□□ -0.85
RABGGTA-220ENST00000560998 LINC00158P58513 81 aa9.74□□□□□ -0.85
RABGGTA-220ENST00000560998 ENHOQ6UWT2 76 aa9.74□□□□□ -0.85
RABGGTA-220ENST00000560998 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
RABGGTA-220ENST00000560998 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
RABGGTA-220ENST00000560998 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
RABGGTA-220ENST00000560998 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
RABGGTA-220ENST00000560998 NDUFC1O43677 76 aa9.72□□□□□ -0.85
RABGGTA-220ENST00000560998 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
RABGGTA-220ENST00000560998 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
RABGGTA-220ENST00000560998 OTOGQ6ZRI0 2925 aa9.71□□□□□ -0.86
RABGGTA-220ENST00000560998 SLPIP03973 132 aa9.7□□□□□ -0.86
RABGGTA-220ENST00000560998 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
RABGGTA-220ENST00000560998 INAFM1C9JVW0 142 aa9.7□□□□□ -0.86
RABGGTA-220ENST00000560998 UBE2L6O14933 153 aa9.7□□□□□ -0.86
RABGGTA-220ENST00000560998 PAX4O43316 350 aa9.7□□□□□ -0.86
RABGGTA-220ENST00000560998 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
RABGGTA-220ENST00000560998 Q8N814 137 aa9.68□□□□□ -0.86
RABGGTA-220ENST00000560998 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
RABGGTA-220ENST00000560998 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 LOC110117498A0A087WWA1 95 aa9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 NSD1Q96L73 2696 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
RABGGTA-220ENST00000560998 SPATA3Q8NHX4 192 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms