RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
ETFA-218ENST00000560899 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
ETFA-218ENST00000560899 A0A0J9YXV3 536 aa10.89□□□□□ -0.67
ETFA-218ENST00000560899 LINC00310P59036 64 aa10.89□□□□□ -0.67
ETFA-218ENST00000560899 STPG4Q8N801 248 aa10.89□□□□□ -0.67
ETFA-218ENST00000560899 TLX1NBP0CAT3 122 aa10.88□□□□□ -0.67
ETFA-218ENST00000560899 NDUFA6P56556 154 aa10.88□□□□□ -0.67
ETFA-218ENST00000560899 FAM19A2Q8N3H0 131 aa10.88□□□□□ -0.67
ETFA-218ENST00000560899 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
ETFA-218ENST00000560899 IGLV5-45A0A087WSX0 123 aa10.87□□□□□ -0.67
ETFA-218ENST00000560899 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
ETFA-218ENST00000560899 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
ETFA-218ENST00000560899 TRBV30A0A0K0K1B3 111 aa10.86□□□□□ -0.67
ETFA-218ENST00000560899 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
ETFA-218ENST00000560899 Q8IZM0 81 aa10.86□□□□□ -0.67
ETFA-218ENST00000560899 LINC00469Q8N7U9 141 aa10.86□□□□□ -0.67
ETFA-218ENST00000560899 C7orf33Q8WU49 177 aa10.86□□□□□ -0.67
ETFA-218ENST00000560899 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 NUPR1O60356 82 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 LEPROTL1O95214 131 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 PACRGQ96M98 296 aaPredicted RBP10.85□□□□□ -0.67
ETFA-218ENST00000560899 C6orf48Q9UBA6 75 aa10.85□□□□□ -0.67
ETFA-218ENST00000560899 GAGE2BQ13066 116 aa10.84□□□□□ -0.67
ETFA-218ENST00000560899 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
ETFA-218ENST00000560899 H3BRM9 83 aa10.83□□□□□ -0.68
ETFA-218ENST00000560899 PRSS2P07478 247 aa10.83□□□□□ -0.68
ETFA-218ENST00000560899 RPL18AQ02543 176 aaKnown RBP10.83□□□□□ -0.68
ETFA-218ENST00000560899 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
ETFA-218ENST00000560899 CXCL5P42830 114 aa10.82□□□□□ -0.68
ETFA-218ENST00000560899 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
ETFA-218ENST00000560899 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
ETFA-218ENST00000560899 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
ETFA-218ENST00000560899 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
ETFA-218ENST00000560899 CKS1BP61024 79 aa10.8□□□□□ -0.68
ETFA-218ENST00000560899 C6orf226Q5I0X4 101 aa10.8□□□□□ -0.68
ETFA-218ENST00000560899 Q6ZRP5 223 aa10.8□□□□□ -0.68
ETFA-218ENST00000560899 KRTAP29-1A8MX34 341 aaPredicted RBP10.79□□□□□ -0.68
ETFA-218ENST00000560899 NDUFC2-KCTD14E9PQ53 114 aa10.79□□□□□ -0.68
ETFA-218ENST00000560899 FABP4P15090 132 aa10.79□□□□□ -0.68
ETFA-218ENST00000560899 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
ETFA-218ENST00000560899 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
ETFA-218ENST00000560899 F8VRH5 84 aa10.78□□□□□ -0.68
ETFA-218ENST00000560899 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
ETFA-218ENST00000560899 C9orf116Q5BN46 136 aaPredicted RBP10.78□□□□□ -0.68
ETFA-218ENST00000560899 PKHD1L1Q86WI1 4243 aa10.77□□□□□ -0.68
ETFA-218ENST00000560899 A0A1W2PNN7 141 aa10.77□□□□□ -0.69
ETFA-218ENST00000560899 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
ETFA-218ENST00000560899 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
ETFA-218ENST00000560899 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
ETFA-218ENST00000560899 COX7B2Q8TF08 81 aa10.76□□□□□ -0.69
ETFA-218ENST00000560899 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
ETFA-218ENST00000560899 OXTP01178 125 aa10.75□□□□□ -0.69
ETFA-218ENST00000560899 ODF1Q14990 250 aa10.75□□□□□ -0.69
ETFA-218ENST00000560899 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
ETFA-218ENST00000560899 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
ETFA-218ENST00000560899 H0Y8G0 127 aa10.74□□□□□ -0.69
ETFA-218ENST00000560899 PLNP26678 52 aa10.72□□□□□ -0.69
ETFA-218ENST00000560899 GAGE2EQ4V326 116 aa10.72□□□□□ -0.69
ETFA-218ENST00000560899 GAGE2DQ9UEU5 116 aa10.72□□□□□ -0.69
ETFA-218ENST00000560899 TMEM223A0PJW6 202 aa10.7□□□□□ -0.7
ETFA-218ENST00000560899 DPM2O94777 84 aa10.7□□□□□ -0.7
ETFA-218ENST00000560899 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
ETFA-218ENST00000560899 SYS1-DBNDD2H3BUS1 97 aa10.69□□□□□ -0.7
ETFA-218ENST00000560899 J3QL48 77 aa10.69□□□□□ -0.7
ETFA-218ENST00000560899 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
ETFA-218ENST00000560899 FAM168BA1KXE4 195 aa10.68□□□□□ -0.7
ETFA-218ENST00000560899 KRTAP7-1Q8IUC3 87 aa10.68□□□□□ -0.7
ETFA-218ENST00000560899 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
ETFA-218ENST00000560899 IGKCP01834 107 aa10.67□□□□□ -0.7
ETFA-218ENST00000560899 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
ETFA-218ENST00000560899 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
ETFA-218ENST00000560899 FAM19A5Q7Z5A7 132 aaPredicted RBP10.67□□□□□ -0.7
ETFA-218ENST00000560899 M0QXV9 152 aa10.66□□□□□ -0.7
ETFA-218ENST00000560899 S100A6P06703 90 aa10.66□□□□□ -0.7
ETFA-218ENST00000560899 PSORS1C2Q9UIG4 136 aa10.66□□□□□ -0.7
ETFA-218ENST00000560899 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
ETFA-218ENST00000560899 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
ETFA-218ENST00000560899 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
ETFA-218ENST00000560899 HERC1Q15751 4861 aa10.64□□□□□ -0.71
ETFA-218ENST00000560899 C3orf79P0CE67 100 aa10.64□□□□□ -0.71
ETFA-218ENST00000560899 HERVK_113P61574 105 aa10.64□□□□□ -0.71
ETFA-218ENST00000560899 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■■■■□ 21.5
ETFA-218ENST00000560899 LINC01545Q5VT33 79 aa10.64□□□□□ -0.71
ETFA-218ENST00000560899 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
ETFA-218ENST00000560899 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
ETFA-218ENST00000560899 S100A2P29034 98 aa10.62□□□□□ -0.71
ETFA-218ENST00000560899 KRTDAPP60985 99 aa10.62□□□□□ -0.71
ETFA-218ENST00000560899 COX17Q14061 63 aa10.62□□□□□ -0.71
ETFA-218ENST00000560899 HIST3H2BBQ8N257 126 aa10.62□□□□□ -0.71
ETFA-218ENST00000560899 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
ETFA-218ENST00000560899 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
ETFA-218ENST00000560899 LEPROTO15243 131 aa10.61□□□□□ -0.71
ETFA-218ENST00000560899 SERTAD4-AS1Q5TG53 156 aa10.61□□□□□ -0.71
ETFA-218ENST00000560899 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
ETFA-218ENST00000560899 C20orf202A1L168 122 aa10.6□□□□□ -0.71
ETFA-218ENST00000560899 AKR1D1P51857 326 aa10.59□□□□□ -0.71
ETFA-218ENST00000560899 C1orf137Q5JT78 98 aa10.59□□□□□ -0.71
ETFA-218ENST00000560899 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms