RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 CSMD2Q7Z408 3487 aa3.74□□□□□ -1.81
ZEB1-219ENST00000560721 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
ZEB1-219ENST00000560721 CSPG4Q6UVK1 2322 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 LST1O00453 97 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 TLX1NBP0CAT3 122 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 COL12A1Q99715 3063 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 IGLV5-39A0A0G2JS06 123 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 KNCNA6PVL3 124 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 NDUFA1O15239 70 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 MXRA5Q9NR99 2828 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 ACANP16112 2415 aa3.73□□□□□ -1.81
ZEB1-219ENST00000560721 TEX49A0A1B0GTD5 131 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 DEFB104AQ8WTQ1 72 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 IGHV3OR16-12A0A075B7B8 117 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 TRAV8-3A0A0A6YYJ7 113 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 C1orf195Q5TG92 126 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 NDUFA12Q9UI09 145 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 LYSTQ99698 3801 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 MAST4O15021 2626 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 IBA57-AS1B1ANH7 110 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 NDUFV3P56181 108 aaKnown RBP3.72□□□□□ -1.81
ZEB1-219ENST00000560721 Q6ZSN1 163 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 UBE2WQ96B02 151 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 DSCR8Q96T75 97 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 ITPR2Q14571 2701 aa3.72□□□□□ -1.81
ZEB1-219ENST00000560721 DNAH2Q9P225 4427 aa3.71□□□□□ -1.81
ZEB1-219ENST00000560721 FLNAP21333 2647 aaKnown RBP3.71□□□□□ -1.81
ZEB1-219ENST00000560721 LINC00336Q6ZUF6 198 aa3.71□□□□□ -1.81
ZEB1-219ENST00000560721 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.81
ZEB1-219ENST00000560721 DUX3Q96PT4 197 aa3.71□□□□□ -1.81
ZEB1-219ENST00000560721 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 TRBV7-7A0A0K0K1E9 115 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 TEX15Q9BXT5 2789 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 COX6CP09669 75 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
ZEB1-219ENST00000560721 TMEM101Q96IK0 257 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 LINC01587Q99440 93 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 Q9UF83 564 aa3.71□□□□□ -1.82
ZEB1-219ENST00000560721 IGLV5-37A0A075B6J1 123 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 LINC00528Q8N1L1 170 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 LRRK2Q5S007 2527 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 OXTP01178 125 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 RPL36AP83881 106 aaKnown RBP3.7□□□□□ -1.82
ZEB1-219ENST00000560721 C2orf82Q6UX34 121 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 RPL36ALQ969Q0 106 aaKnown RBP3.7□□□□□ -1.82
ZEB1-219ENST00000560721 PKHD1P08F94 4074 aa3.7□□□□□ -1.82
ZEB1-219ENST00000560721 A0A096LPF7 62 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 IGKV3-20P01619 116 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 ACYP1P07311 99 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 HERVK_113P63121 156 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 RMI2Q96E14 147 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
ZEB1-219ENST00000560721 IMUPQ9GZP8 106 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 CDKN2A-AS1Q9UH64 79 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 TRBV6-8A0A0A6YYG3 113 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
ZEB1-219ENST00000560721 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 DNAH10Q8IVF4 4471 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 COX7A2LO14548 114 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 CXCL5P42830 114 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 COX6A2Q02221 97 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 Q1RN00 199 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 COPS9Q8WXC6 57 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 C22orf24Q9Y442 160 aa3.69□□□□□ -1.82
ZEB1-219ENST00000560721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
ZEB1-219ENST00000560721 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
ZEB1-219ENST00000560721 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 TNP2Q05952 138 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 Q6ZRN7 208 aaPredicted RBP3.68□□□□□ -1.82
ZEB1-219ENST00000560721 CUBNO60494 3623 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 SETXQ7Z333 2677 aaKnown RBP3.68□□□□□ -1.82
ZEB1-219ENST00000560721 FAM229AH3BQW9 127 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 TRACP01848 142 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 FAM222AQ5U5X8 452 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 LYPD5Q6UWN5 251 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 CLEC2BQ92478 149 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 FLNBO75369 2602 aaKnown RBP3.68□□□□□ -1.82
ZEB1-219ENST00000560721 IGHV3-73A0A0B4J1V6 119 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 PRYO14603 147 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 PRSS2P07478 247 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 DAD1P61803 113 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 COX17Q14061 63 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 C14orf177Q52M58 125 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 LINC00526Q96FQ7 95 aa3.68□□□□□ -1.82
ZEB1-219ENST00000560721 LCE6AA0A183 80 aa3.67□□□□□ -1.82
ZEB1-219ENST00000560721 REG3AQ06141 175 aa3.67□□□□□ -1.82
ZEB1-219ENST00000560721 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
ZEB1-219ENST00000560721 GAGE2AQ6NT46 116 aa3.67□□□□□ -1.82
ZEB1-219ENST00000560721 SOSTDC1Q6X4U4 206 aa3.67□□□□□ -1.82
ZEB1-219ENST00000560721 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
ZEB1-219ENST00000560721 PRM2P04554 102 aa3.66□□□□□ -1.82
ZEB1-219ENST00000560721 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
ZEB1-219ENST00000560721 POLQO75417 2590 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms