RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
USP8-208ENST00000559329 ANGP03950 147 aaKnown RBP10.9□□□□□ -0.67
USP8-208ENST00000559329 LINC01620Q4KN68 170 aa10.9□□□□□ -0.67
USP8-208ENST00000559329 TEN1Q86WV5 123 aa10.9□□□□□ -0.67
USP8-208ENST00000559329 SLC25A20O43772 301 aa10.89□□□□□ -0.67
USP8-208ENST00000559329 CHCHD10Q8WYQ3 142 aaPredicted RBP10.89□□□□□ -0.67
USP8-208ENST00000559329 C11orf68Q9H3H3 251 aaKnown RBP10.89□□□□□ -0.67
USP8-208ENST00000559329 C9JAW5 83 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 J3QR89 54 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 COX6CP09669 75 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 FOXI1Q12951 378 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 H3BNG1 76 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 C6orf226Q5I0X4 101 aa10.88□□□□□ -0.67
USP8-208ENST00000559329 LST1O00453 97 aa10.87□□□□□ -0.67
USP8-208ENST00000559329 KIAA0087Q14695 138 aa10.87□□□□□ -0.67
USP8-208ENST00000559329 COX7A2LO14548 114 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 LINC00158P58513 81 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 PRR34Q9NV39 138 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 CCL18P55774 89 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 ANKRD29Q8N6D5 301 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
USP8-208ENST00000559329 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
USP8-208ENST00000559329 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
USP8-208ENST00000559329 PPDPFLQ8WWR9 84 aa10.85□□□□□ -0.67
USP8-208ENST00000559329 CLEC2BQ92478 149 aa10.85□□□□□ -0.67
USP8-208ENST00000559329 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
USP8-208ENST00000559329 IGLV10-54A0A075B6I4 117 aa10.84□□□□□ -0.67
USP8-208ENST00000559329 TRBV10-2A0A0K0K1G8 114 aa10.84□□□□□ -0.67
USP8-208ENST00000559329 Q6ZTC4 211 aa10.84□□□□□ -0.67
USP8-208ENST00000559329 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
USP8-208ENST00000559329 PFN2P35080 140 aa10.83□□□□□ -0.68
USP8-208ENST00000559329 C2orf82Q6UX34 121 aa10.83□□□□□ -0.68
USP8-208ENST00000559329 LINC00337Q8N6G1 96 aa10.83□□□□□ -0.68
USP8-208ENST00000559329 KPRPQ5T749 579 aaPredicted RBP10.82□□□□□ -0.68
USP8-208ENST00000559329 CXCL5P42830 114 aa10.82□□□□□ -0.68
USP8-208ENST00000559329 TENM3Q9P273 2699 aa10.82□□□□□ -0.68
USP8-208ENST00000559329 SPATA25Q9BR10 227 aa10.81□□□□□ -0.68
USP8-208ENST00000559329 CRPP02741 224 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 ENHOQ6UWT2 76 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 H3BT86 120 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 MALP21145 153 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 CKS1BP61024 79 aa10.8□□□□□ -0.68
USP8-208ENST00000559329 A0A0J9YWU9 116 aa10.79□□□□□ -0.68
USP8-208ENST00000559329 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
USP8-208ENST00000559329 RPL28P46779 137 aaKnown RBP10.79□□□□□ -0.68
USP8-208ENST00000559329 KLK5Q9Y337 293 aaPredicted RBP10.79□□□□□ -0.68
USP8-208ENST00000559329 CFAP161Q6P656 301 aa10.78□□□□□ -0.68
USP8-208ENST00000559329 COX17Q14061 63 aa10.78□□□□□ -0.68
USP8-208ENST00000559329 PCP4P48539 62 aa10.77□□□□□ -0.69
USP8-208ENST00000559329 COL6A5A8TX70 2615 aa10.76□□□□□ -0.69
USP8-208ENST00000559329 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
USP8-208ENST00000559329 NTN5Q8WTR8 489 aaPredicted RBP10.76□□□□□ -0.69
USP8-208ENST00000559329 NANOS2P60321 138 aaKnown RBP10.76□□□□□ -0.69
USP8-208ENST00000559329 TRAV8-4A0A0B4J246 113 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 TRACP01848 142 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 ESRGQ1W209 222 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 SMIM11BQ8TCY0 68 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 CDIP1Q9H305 208 aa10.74□□□□□ -0.69
USP8-208ENST00000559329 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
USP8-208ENST00000559329 DEFB131BA0A096LNP1 70 aa10.73□□□□□ -0.69
USP8-208ENST00000559329 TEX49A0A1B0GTD5 131 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 UBE2WQ96B02 151 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 NDUFC2O95298 119 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
USP8-208ENST00000559329 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
USP8-208ENST00000559329 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
USP8-208ENST00000559329 MUC7Q8TAX7 377 aa10.7□□□□□ -0.7
USP8-208ENST00000559329 SIGMAR1Q99720 223 aa10.7□□□□□ -0.7
USP8-208ENST00000559329 TM2D3Q9BRN9 247 aa10.7□□□□□ -0.7
USP8-208ENST00000559329 NBEAL1Q6ZS30 2694 aa10.7□□□□□ -0.7
USP8-208ENST00000559329 GVQW2A0A096LPI5 108 aaPredicted RBP10.69□□□□□ -0.7
USP8-208ENST00000559329 K7EIL1 84 aa10.69□□□□□ -0.7
USP8-208ENST00000559329 PRB2P02812 416 aaPredicted RBP10.68□□□□□ -0.7
USP8-208ENST00000559329 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
USP8-208ENST00000559329 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
USP8-208ENST00000559329 LINC01556Q5JQF7 62 aa10.68□□□□□ -0.7
USP8-208ENST00000559329 H0YGX0 51 aa10.67□□□□□ -0.7
USP8-208ENST00000559329 Q8NDZ9 215 aa10.67□□□□□ -0.7
USP8-208ENST00000559329 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
USP8-208ENST00000559329 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
USP8-208ENST00000559329 C21orf62-AS1Q17RA5 79 aa10.66□□□□□ -0.7
USP8-208ENST00000559329 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
USP8-208ENST00000559329 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.7
USP8-208ENST00000559329 A0A087WYN8 130 aa10.64□□□□□ -0.71
USP8-208ENST00000559329 C6orf48Q9UBA6 75 aa10.64□□□□□ -0.71
USP8-208ENST00000559329 TRAV10A0A0B4J240 114 aa10.64□□□□□ -0.71
USP8-208ENST00000559329 BAALC-AS2P0C853 105 aa10.63□□□□□ -0.71
USP8-208ENST00000559329 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
USP8-208ENST00000559329 XGP55808 180 aa10.62□□□□□ -0.71
USP8-208ENST00000559329 C15orf56Q8N910 161 aa10.62□□□□□ -0.71
USP8-208ENST00000559329 TMEM126AQ9H061 195 aa10.62□□□□□ -0.71
USP8-208ENST00000559329 Q9HAA7 133 aa10.62□□□□□ -0.71
USP8-208ENST00000559329 SCGB1A1P11684 91 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms