RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 WDFY4Q6ZS81 3184 aa3.8□□□□□ -1.8
CTDSPL2-206ENST00000559175 Q8NDZ9 215 aa3.8□□□□□ -1.8
CTDSPL2-206ENST00000559175 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
CTDSPL2-206ENST00000559175 CNOT1A5YKK6 2376 aaKnown RBP3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 LOC101927531A0A1B0GV80 90 aa3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 TNCP24821 2201 aa3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 VPS13AQ96RL7 3174 aa3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 SAA2P0DJI9 122 aaPredicted RBP3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 COX6B1P14854 86 aa3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
CTDSPL2-206ENST00000559175 IGKV1D-37A0A075B6S9 117 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 SPAG11BQ08648 103 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 OTOGLQ3ZCN5 2332 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 C9orf106Q8NAJ2 232 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 NCOR1O75376 2440 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 Q8N3U1 123 aa3.78□□□□□ -1.8
CTDSPL2-206ENST00000559175 CADP27708 2225 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 MSMBP08118 114 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 Q8NAQ8 132 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 ARFGEF3Q5TH69 2177 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 FRYLO94915 3013 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 LYZP61626 148 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 SPINK14Q6IE38 97 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 A0A0C4DFX4 3053 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 CFAP46Q8IYW2 2715 aa3.77□□□□□ -1.81
CTDSPL2-206ENST00000559175 ICE1Q9Y2F5 2266 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 AKAP13Q12802 2813 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 PRB3Q04118 309 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 EP300Q09472 2414 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 LITAFQ99732 161 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 DEFB108BQ8NET1 73 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 LINC00467Q9BRT7 94 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 APC2O95996 2303 aa3.76□□□□□ -1.81
CTDSPL2-206ENST00000559175 Q8TAT8 98 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 TMEM14CQ9P0S9 112 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 ZNRD1Q9P1U0 126 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 TENM4Q6N022 2769 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 SPTBN2O15020 2390 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 DEFB108AA8MXU0 73 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 C9orf129Q5T035 196 aaKnown RBP3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 MGPP08493 103 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 ERHP84090 104 aaKnown RBP3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 SPINK9Q5DT21 86 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 DEFB124Q8NES8 71 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 ROS1P08922 2347 aa3.75□□□□□ -1.81
CTDSPL2-206ENST00000559175 DNAH7Q8WXX0 4024 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 GPR179Q6PRD1 2367 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 LAMA1P25391 3075 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 IGHV1-18A0A0C4DH31 117 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 H3BQ85 93 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
CTDSPL2-206ENST00000559175 A0A096LNT2 108 aa3.73□□□□□ -1.81
CTDSPL2-206ENST00000559175 NCR3O14931 201 aa3.73□□□□□ -1.81
CTDSPL2-206ENST00000559175 RIF1Q5UIP0 2472 aaKnown RBP3.73□□□□□ -1.81
CTDSPL2-206ENST00000559175 NBEAQ8NFP9 2946 aa3.73□□□□□ -1.81
CTDSPL2-206ENST00000559175 RNASE3P12724 160 aaKnown RBP3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 LINC00322Q6ZN03 302 aaPredicted RBP3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 LINC00208Q96KT6 92 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 H3BPC8 53 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 DEFB113Q30KQ7 82 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 KRTAP1-3Q8IUG1 177 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 ATMQ13315 3056 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 TRBV10-1A0A0K0K1A3 114 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 MRGPRG-AS1Q2M3A8 158 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 FAM74A4Q5TZK3 123 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 Q6ZR54 194 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 ZNF833PQ6ZTB9 187 aa3.72□□□□□ -1.81
CTDSPL2-206ENST00000559175 IGHV3OR16-8A0A075B7F1 116 aa3.71□□□□□ -1.81
CTDSPL2-206ENST00000559175 IGIPA6NJ69 53 aa3.71□□□□□ -1.81
CTDSPL2-206ENST00000559175 MUC7Q8TAX7 377 aa3.71□□□□□ -1.81
CTDSPL2-206ENST00000559175 SPTBN1Q01082 2364 aaKnown RBP3.71□□□□□ -1.81
CTDSPL2-206ENST00000559175 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 DMXL2Q8TDJ6 3036 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 USP24Q9UPU5 2620 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 SORL1Q92673 2214 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 DEFB109BQ30KR1 87 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 GAFA1Q96PS6 74 aa3.71□□□□□ -1.82
CTDSPL2-206ENST00000559175 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 NDUFB1O75438 58 aa3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 CACNA1HO95180 2353 aa3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 MRPL36Q9P0J6 103 aaKnown RBP3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 ACACAQ13085 2346 aa3.7□□□□□ -1.82
CTDSPL2-206ENST00000559175 PRRC2AP48634 2157 aaKnown RBP3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 WNK2Q9Y3S1 2297 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 VPS13CQ709C8 3753 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 CLPSL1A2RUU4 121 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms