RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 A0A096LNI7 61 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 IGKV2-24A0A0C4DH68 120 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 A0A1W2PNN7 141 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 PPP1R2P9O14990 202 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 UNQ6190/PRO20217Q6UXQ8 127 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 Q6ZRU5 148 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 LINC00173Q6ZV60 143 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 ORMDL3Q8N138 153 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 Q8N8P6 123 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 TMEM101Q96IK0 257 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 SEC11CQ9BY50 192 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 HERC1Q15751 4861 aa2.64□□□□□ -1.99
SPG11-211ENST00000558561 IGHV3OR16-9A0A0B4J2B5 98 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 A0A1B0GW15 77 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 FAM168BA1KXE4 195 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 IGIPA6NJ69 53 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 APOC3P02656 99 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 CNBPP62633 177 aaKnown RBP2.63□□□□□ -1.99
SPG11-211ENST00000558561 RPL32P62910 135 aaKnown RBP2.63□□□□□ -1.99
SPG11-211ENST00000558561 KIAA0087Q14695 138 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 SS18Q15532 418 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 MAJINQ3KP22 176 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 C9orf116Q5BN46 136 aaPredicted RBP2.63□□□□□ -1.99
SPG11-211ENST00000558561 LINC00242Q5T6M2 205 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 UQCC3Q6UW78 93 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 C2orf66Q6UXQ4 117 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 BTF3L4Q96K17 158 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 YPEL4Q96NS1 127 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 KIR2DL4Q99706 377 aa2.63□□□□□ -1.99
SPG11-211ENST00000558561 CARHSP1Q9Y2V2 147 aaKnown RBP2.63□□□□□ -1.99
SPG11-211ENST00000558561 IGHV3-64A0A075B6Q5 118 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 A0A096LNJ9 63 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 GVQW2A0A096LPI5 108 aaPredicted RBP2.62□□□□□ -1.99
SPG11-211ENST00000558561 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 PHOX2AO14813 284 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 PPBPP02775 128 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 ZNF25P17030 456 aaPredicted RBP2.62□□□□□ -1.99
SPG11-211ENST00000558561 UBE2D1P51668 147 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 PKIAP61925 76 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 SYCNQ0VAF6 134 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 FABP9Q0Z7S8 132 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
SPG11-211ENST00000558561 PMCHL1Q16048 86 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 ATP5L2Q7Z4Y8 100 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 SPACA4Q8TDM5 124 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 AMELXQ99217 191 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
SPG11-211ENST00000558561 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
SPG11-211ENST00000558561 C1orf196B1AJZ1 125 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.61□□□□□ -1.99
SPG11-211ENST00000558561 NUPR1O60356 82 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 PPP1R17O96001 155 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 S100A8P05109 93 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 RAB5AP20339 215 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 MRPS36P82909 103 aaKnown RBP2.61□□□□□ -1.99
SPG11-211ENST00000558561 PHF5AQ7RTV0 110 aaKnown RBP2.61□□□□□ -1.99
SPG11-211ENST00000558561 CBLN2Q8IUK8 224 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 TYMSOSQ8TAI1 123 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 ORAOV1Q8WV07 137 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 GNB1LQ9BYB4 327 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 MAP1LC3AQ9H492 121 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 PLAC8Q9NZF1 115 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 C6orf48Q9UBA6 75 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 CDKN2A-AS1Q9UH64 79 aa2.61□□□□□ -1.99
SPG11-211ENST00000558561 TNXBP22105 4242 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 COX7A2LO14548 114 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 SCO1O75880 301 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 RPL37AP61513 92 aaKnown RBP2.6□□□□□ -1.99
SPG11-211ENST00000558561 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 LINC00469Q8N7U9 141 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 C18orf32Q8TCD1 76 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 TOMM6Q96B49 74 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 CARD19Q96LW7 228 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 VCX2Q9H322 139 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 SPANXA1Q9NS26 97 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 TRAPPC1Q9Y5R8 145 aa2.6□□□□□ -1.99
SPG11-211ENST00000558561 LINC01546A6NGU7 62 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 C9orf129Q5T035 196 aaKnown RBP2.59□□□□□ -1.99
SPG11-211ENST00000558561 FAM19A2Q8N3H0 131 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 TMEM141Q96I45 108 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 CST9LQ9H4G1 147 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 TOMM7Q9P0U1 55 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 DHRS4-AS1Q9P1J3 65 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 CYSLTR1Q9Y271 337 aa2.59□□□□□ -1.99
SPG11-211ENST00000558561 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -2
SPG11-211ENST00000558561 TRAV9-1A0A075B6T8 112 aa2.58□□□□□ -2
SPG11-211ENST00000558561 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.58□□□□□ -2
SPG11-211ENST00000558561 LOC107984640A0A0U1RRK4 108 aa2.58□□□□□ -2
SPG11-211ENST00000558561 COLCA2A8K830 154 aa2.58□□□□□ -2
SPG11-211ENST00000558561 TRGC2P03986 189 aa2.58□□□□□ -2
SPG11-211ENST00000558561 SPINK8P0C7L1 97 aa2.58□□□□□ -2
SPG11-211ENST00000558561 LINC00614P0C842 121 aa2.58□□□□□ -2
SPG11-211ENST00000558561 S100PP25815 95 aa2.58□□□□□ -2
SPG11-211ENST00000558561 RAB5BP61020 215 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms