RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 C7orf33Q8WU49 177 aa13.15□□□□□ -0.3
TMOD3-203ENST00000558455 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
TMOD3-203ENST00000558455 COLCA2A8K830 154 aa13.14□□□□□ -0.31
TMOD3-203ENST00000558455 SMIM1B2RUZ4 78 aa13.14□□□□□ -0.31
TMOD3-203ENST00000558455 ATP5LO75964 103 aa13.14□□□□□ -0.31
TMOD3-203ENST00000558455 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
TMOD3-203ENST00000558455 TLX1NBP0CAT3 122 aa13.13□□□□□ -0.31
TMOD3-203ENST00000558455 CKS1BP61024 79 aa13.13□□□□□ -0.31
TMOD3-203ENST00000558455 Q6ZRP5 223 aa13.12□□□□□ -0.31
TMOD3-203ENST00000558455 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
TMOD3-203ENST00000558455 A0A1W2PNN7 141 aa13.11□□□□□ -0.31
TMOD3-203ENST00000558455 SPINK8P0C7L1 97 aa13.11□□□□□ -0.31
TMOD3-203ENST00000558455 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
TMOD3-203ENST00000558455 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
TMOD3-203ENST00000558455 C9orf116Q5BN46 136 aaPredicted RBP13.1□□□□□ -0.31
TMOD3-203ENST00000558455 SCO1O75880 301 aa13.09□□□□□ -0.31
TMOD3-203ENST00000558455 GAGE2EQ4V326 116 aa13.09□□□□□ -0.31
TMOD3-203ENST00000558455 GAGE2DQ9UEU5 116 aa13.09□□□□□ -0.31
TMOD3-203ENST00000558455 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
TMOD3-203ENST00000558455 H3BRM9 83 aa13.08□□□□□ -0.32
TMOD3-203ENST00000558455 HSBP1O75506 76 aa13.08□□□□□ -0.32
TMOD3-203ENST00000558455 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
TMOD3-203ENST00000558455 DMBT1Q9UGM3 2413 aaPredicted RBP13.07□□□□□ -0.32
TMOD3-203ENST00000558455 F8VRH5 84 aa13.07□□□□□ -0.32
TMOD3-203ENST00000558455 CXCL5P42830 114 aa13.07□□□□□ -0.32
TMOD3-203ENST00000558455 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
TMOD3-203ENST00000558455 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
TMOD3-203ENST00000558455 LINC00310P59036 64 aa13.06□□□□□ -0.32
TMOD3-203ENST00000558455 IFI27L1Q96BM0 104 aa13.06□□□□□ -0.32
TMOD3-203ENST00000558455 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
TMOD3-203ENST00000558455 SERF1AO75920 110 aa13.05□□□□□ -0.32
TMOD3-203ENST00000558455 PRR3P79522 188 aaKnown RBP13.05□□□□□ -0.32
TMOD3-203ENST00000558455 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
TMOD3-203ENST00000558455 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
TMOD3-203ENST00000558455 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
TMOD3-203ENST00000558455 PKHD1L1Q86WI1 4243 aa13.02□□□□□ -0.33
TMOD3-203ENST00000558455 TRAV12-1A0A0B4J245 112 aa13.01□□□□□ -0.33
TMOD3-203ENST00000558455 C9orf129Q5T035 196 aaKnown RBP13.01□□□□□ -0.33
TMOD3-203ENST00000558455 PHF5AQ7RTV0 110 aaKnown RBP13.01□□□□□ -0.33
TMOD3-203ENST00000558455 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
TMOD3-203ENST00000558455 KRTAP29-1A8MX34 341 aaPredicted RBP13□□□□□ -0.33
TMOD3-203ENST00000558455 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
TMOD3-203ENST00000558455 NUPR1O60356 82 aa12.99□□□□□ -0.33
TMOD3-203ENST00000558455 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
TMOD3-203ENST00000558455 J3QL48 77 aa12.97□□□□□ -0.33
TMOD3-203ENST00000558455 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
TMOD3-203ENST00000558455 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
TMOD3-203ENST00000558455 LRP1Q07954 4544 aaKnown RBP12.96□□□□□ -0.33
TMOD3-203ENST00000558455 M0QXV9 152 aa12.95□□□□□ -0.34
TMOD3-203ENST00000558455 H0Y8G0 127 aa12.94□□□□□ -0.34
TMOD3-203ENST00000558455 OXTP01178 125 aa12.94□□□□□ -0.34
TMOD3-203ENST00000558455 PSORS1C2Q9UIG4 136 aa12.94□□□□□ -0.34
TMOD3-203ENST00000558455 HERC1Q15751 4861 aa12.94□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BKO60814 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BJP06899 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BOP23527 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BBP33778 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BDP58876 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BCP62807 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 ODF1Q14990 250 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST2H2BEQ16778 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BHQ93079 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BNQ99877 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HIST1H2BMQ99879 126 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 HSPB8Q9UJY1 196 aa12.93□□□□□ -0.34
TMOD3-203ENST00000558455 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
TMOD3-203ENST00000558455 FABP4P15090 132 aa12.92□□□□□ -0.34
TMOD3-203ENST00000558455 SERTAD4-AS1Q5TG53 156 aa12.92□□□□□ -0.34
TMOD3-203ENST00000558455 KRTAP11-1Q8IUC1 163 aa12.92□□□□□ -0.34
TMOD3-203ENST00000558455 FAT3Q8TDW7 4589 aa12.92□□□□□ -0.34
TMOD3-203ENST00000558455 PFN2P35080 140 aa12.88□□□□□ -0.35
TMOD3-203ENST00000558455 C1orf137Q5JT78 98 aa12.88□□□□□ -0.35
TMOD3-203ENST00000558455 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
TMOD3-203ENST00000558455 UBE2BP63146 152 aa12.87□□□□□ -0.35
TMOD3-203ENST00000558455 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
TMOD3-203ENST00000558455 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
TMOD3-203ENST00000558455 ERG28Q9UKR5 140 aa12.87□□□□□ -0.35
TMOD3-203ENST00000558455 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
TMOD3-203ENST00000558455 SRSF9Q13242 221 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMOD3-203ENST00000558455 PLNP26678 52 aa12.84□□□□□ -0.35
TMOD3-203ENST00000558455 PMCHL2Q9BQD1 86 aa12.84□□□□□ -0.35
TMOD3-203ENST00000558455 COX17Q14061 63 aa12.83□□□□□ -0.36
TMOD3-203ENST00000558455 MAP1LC3CQ9BXW4 147 aa12.83□□□□□ -0.36
TMOD3-203ENST00000558455 TP73-AS1Q9UF72 201 aa12.83□□□□□ -0.36
TMOD3-203ENST00000558455 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
TMOD3-203ENST00000558455 DPM2O94777 84 aa12.82□□□□□ -0.36
TMOD3-203ENST00000558455 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
TMOD3-203ENST00000558455 IGLV7-43P04211 117 aa12.81□□□□□ -0.36
TMOD3-203ENST00000558455 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
TMOD3-203ENST00000558455 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
TMOD3-203ENST00000558455 MT1HL1P0DM35 61 aa12.79□□□□□ -0.36
TMOD3-203ENST00000558455 S100A1P23297 94 aa12.79□□□□□ -0.36
TMOD3-203ENST00000558455 IGLV5-37A0A075B6J1 123 aa12.78□□□□□ -0.36
TMOD3-203ENST00000558455 ATP6V1G1O75348 118 aa12.78□□□□□ -0.36
TMOD3-203ENST00000558455 IGKCP01834 107 aa12.78□□□□□ -0.36
TMOD3-203ENST00000558455 LINC00158P58513 81 aa12.77□□□□□ -0.37
TMOD3-203ENST00000558455 TSPEAR-AS2P59090 65 aa12.77□□□□□ -0.37
TMOD3-203ENST00000558455 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
TMOD3-203ENST00000558455 REG3GQ6UW15 175 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms