RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 RPL7L1Q6DKI1 246 aaKnown RBP2.75□□□□□ -1.97
ZEB1-210ENST00000557827 SBSPONQ8IVN8 264 aa2.75□□□□□ -1.97
ZEB1-210ENST00000557827 PPP3R2Q96LZ3 170 aa2.75□□□□□ -1.97
ZEB1-210ENST00000557827 IER3IP1Q9Y5U9 82 aa2.75□□□□□ -1.97
ZEB1-210ENST00000557827 CCKP06307 115 aa2.74□□□□□ -1.97
ZEB1-210ENST00000557827 UBE2G1P62253 170 aa2.74□□□□□ -1.97
ZEB1-210ENST00000557827 C9orf116Q5BN46 136 aaPredicted RBP2.74□□□□□ -1.97
ZEB1-210ENST00000557827 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
ZEB1-210ENST00000557827 IFI27L1Q96BM0 104 aa2.74□□□□□ -1.97
ZEB1-210ENST00000557827 A0A0G2JND7 137 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 LOC285095A0A1B0GVY8 99 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 TCRBV3S1A0A5B6 114 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 HIGD1CA8MV81 97 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 SNRNP200O75643 2136 aaKnown RBP2.73□□□□□ -1.97
ZEB1-210ENST00000557827 HMGA1P17096 107 aaKnown RBP2.73□□□□□ -1.97
ZEB1-210ENST00000557827 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 C12orf73Q69YU5 71 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 C10orf105Q8TEF2 133 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 TSKUQ8WUA8 353 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 C10orf82Q8WW14 230 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 MRPL57Q9BQC6 102 aaKnown RBP2.73□□□□□ -1.97
ZEB1-210ENST00000557827 RYR2Q92736 4967 aa2.73□□□□□ -1.97
ZEB1-210ENST00000557827 SORL1Q92673 2214 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 CBLN1P23435 193 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 FXYD4P59646 89 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 Q8N8P6 123 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 RPRMQ9NS64 109 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 COA4Q9NYJ1 87 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 MGAQ8IWI9 3026 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 TSC2P49815 1807 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 SPAG17Q6Q759 2223 aa2.72□□□□□ -1.97
ZEB1-210ENST00000557827 MED13Q9UHV7 2174 aa2.71□□□□□ -1.97
ZEB1-210ENST00000557827 A6NIN4 97 aa2.71□□□□□ -1.98
ZEB1-210ENST00000557827 GTF2H5Q6ZYL4 71 aa2.71□□□□□ -1.98
ZEB1-210ENST00000557827 DEFB119Q8N690 84 aa2.71□□□□□ -1.98
ZEB1-210ENST00000557827 AKAP9Q99996 3911 aa2.71□□□□□ -1.98
ZEB1-210ENST00000557827 TRAV12-3A0A0B4J271 114 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 LOC101927531A0A1B0GV80 90 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 IGKV2-29A2NJV5 120 aaPredicted RBP2.7□□□□□ -1.98
ZEB1-210ENST00000557827 OOSP1A8MZH6 123 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 NPC2P61916 151 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 INSL4Q14641 139 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 PATJQ8NI35 1801 aa2.7□□□□□ -1.98
ZEB1-210ENST00000557827 SPANXDQ9BXN6 97 aa2.69□□□□□ -1.98
ZEB1-210ENST00000557827 CUBNO60494 3623 aa2.69□□□□□ -1.98
ZEB1-210ENST00000557827 LAMA1P25391 3075 aa2.69□□□□□ -1.98
ZEB1-210ENST00000557827 ATMQ13315 3056 aa2.69□□□□□ -1.98
ZEB1-210ENST00000557827 SPTBP11277 2137 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 ESPL1Q14674 2120 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 NBDYA0A0U1RRE5 68 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 SMIM31A0A1B0GVY4 71 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 CCL22O00626 93 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 RBM3P98179 157 aaKnown RBP2.68□□□□□ -1.98
ZEB1-210ENST00000557827 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 DSCR8Q96T75 97 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 AMELYQ99218 206 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 CSMD2Q7Z408 3487 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 HERC2O95714 4834 aa2.68□□□□□ -1.98
ZEB1-210ENST00000557827 NCOA6Q14686 2063 aaPredicted RBP2.67□□□□□ -1.98
ZEB1-210ENST00000557827 TANC1Q9C0D5 1861 aa2.67□□□□□ -1.98
ZEB1-210ENST00000557827 DEFB107AQ8IZN7 70 aa2.67□□□□□ -1.98
ZEB1-210ENST00000557827 FAIMQ9NVQ4 179 aa2.67□□□□□ -1.98
ZEB1-210ENST00000557827 PRRC2CQ9Y520 2896 aaKnown RBP2.67□□□□□ -1.98
ZEB1-210ENST00000557827 MED13LQ71F56 2210 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 MEGF8Q7Z7M0 2845 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 IFNA17P01571 189 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 SPINT3P49223 89 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 HSD52Q0P140 79 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 FXYD3Q14802 87 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 XAF1Q6GPH4 301 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 SVBPQ8N300 66 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 BSNQ9UPA5 3926 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 ABCA4P78363 2273 aa2.66□□□□□ -1.98
ZEB1-210ENST00000557827 CACNA1EQ15878 2313 aa2.65□□□□□ -1.98
ZEB1-210ENST00000557827 CSPG4Q6UVK1 2322 aa2.65□□□□□ -1.98
ZEB1-210ENST00000557827 NBASA2RRP1 2371 aa2.65□□□□□ -1.98
ZEB1-210ENST00000557827 SPTBN1Q01082 2364 aaKnown RBP2.65□□□□□ -1.98
ZEB1-210ENST00000557827 VPS13CQ709C8 3753 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 COL6A6A6NMZ7 2263 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 PIGBOS1A0A0B4J2F0 54 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 TRBV10-3A0A0K0K1G6 114 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 LINC00032P0C843 101 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 CYP2G1PQ6ZSU1 146 aa2.65□□□□□ -1.99
ZEB1-210ENST00000557827 RPS27LQ71UM5 84 aaKnown RBP2.65□□□□□ -1.99
ZEB1-210ENST00000557827 APCP25054 2843 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 MYO7AQ13402 2215 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 ASCC3Q8N3C0 2202 aaKnown RBP2.64□□□□□ -1.99
ZEB1-210ENST00000557827 NSD1Q96L73 2696 aaPredicted RBP2.64□□□□□ -1.99
ZEB1-210ENST00000557827 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 LOC730098B7Z3J9 87 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 C8orf59Q8N0T1 100 aaPredicted RBP2.64□□□□□ -1.99
ZEB1-210ENST00000557827 DPY30Q9C005 99 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 Q9H521 79 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 AP4S1Q9Y587 144 aa2.64□□□□□ -1.99
ZEB1-210ENST00000557827 DCHS2Q6V1P9 2916 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 TMEM218A2RU14 115 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 FXYD1O00168 92 aa2.63□□□□□ -1.99
ZEB1-210ENST00000557827 IFITM1P13164 125 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms