RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FABP4P15090 132 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 AKR1D1P51857 326 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 Q8N1X5 172 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
SHMT2-234ENST00000557703 PTTG1IPP53801 180 aa8.74□□□□□ -1.01
SHMT2-234ENST00000557703 SCXQ7RTU7 201 aa8.74□□□□□ -1.01
SHMT2-234ENST00000557703 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
SHMT2-234ENST00000557703 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
SHMT2-234ENST00000557703 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
SHMT2-234ENST00000557703 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
SHMT2-234ENST00000557703 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
SHMT2-234ENST00000557703 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
SHMT2-234ENST00000557703 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
SHMT2-234ENST00000557703 DPM2O94777 84 aa8.72□□□□□ -1.01
SHMT2-234ENST00000557703 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
SHMT2-234ENST00000557703 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-234ENST00000557703 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
SHMT2-234ENST00000557703 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.01
SHMT2-234ENST00000557703 A0A096LNI7 61 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 S100A6P06703 90 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 COX17Q14061 63 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
SHMT2-234ENST00000557703 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 A0A087WYN8 130 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 IGKCP01834 107 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 HERVK_113P61574 105 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 HSPG2P98160 4391 aa8.7□□□□□ -1.02
SHMT2-234ENST00000557703 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 LINC00587B1AMM8 73 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 H0Y8G0 127 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 RPL18AQ02543 176 aaKnown RBP8.69□□□□□ -1.02
SHMT2-234ENST00000557703 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 STPG4Q8N801 248 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 HERC2O95714 4834 aa8.69□□□□□ -1.02
SHMT2-234ENST00000557703 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
SHMT2-234ENST00000557703 Q6ZRP5 223 aa8.68□□□□□ -1.02
SHMT2-234ENST00000557703 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
SHMT2-234ENST00000557703 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
SHMT2-234ENST00000557703 C20orf202A1L168 122 aa8.67□□□□□ -1.02
SHMT2-234ENST00000557703 PANO1I0J062 215 aa8.67□□□□□ -1.02
SHMT2-234ENST00000557703 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
SHMT2-234ENST00000557703 S100A2P29034 98 aa8.67□□□□□ -1.02
SHMT2-234ENST00000557703 HERV-K104P63124 156 aa8.67□□□□□ -1.02
SHMT2-234ENST00000557703 RYR1P21817 5038 aa8.66□□□□□ -1.02
SHMT2-234ENST00000557703 NMUP48645 174 aa8.66□□□□□ -1.02
SHMT2-234ENST00000557703 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
SHMT2-234ENST00000557703 LEPROTO15243 131 aa8.65□□□□□ -1.02
SHMT2-234ENST00000557703 C3orf79P0CE67 100 aa8.65□□□□□ -1.02
SHMT2-234ENST00000557703 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
SHMT2-234ENST00000557703 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.02
SHMT2-234ENST00000557703 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
SHMT2-234ENST00000557703 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-234ENST00000557703 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-234ENST00000557703 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
SHMT2-234ENST00000557703 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
SHMT2-234ENST00000557703 Q5VSD8 79 aa8.63□□□□□ -1.03
SHMT2-234ENST00000557703 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
SHMT2-234ENST00000557703 E9PLD3 99 aa8.62□□□□□ -1.03
SHMT2-234ENST00000557703 KRTDAPP60985 99 aa8.62□□□□□ -1.03
SHMT2-234ENST00000557703 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
SHMT2-234ENST00000557703 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
SHMT2-234ENST00000557703 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
SHMT2-234ENST00000557703 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
SHMT2-234ENST00000557703 J3QQQ9 107 aa8.61□□□□□ -1.03
SHMT2-234ENST00000557703 HAMPP81172 84 aa8.61□□□□□ -1.03
SHMT2-234ENST00000557703 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
SHMT2-234ENST00000557703 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
SHMT2-234ENST00000557703 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
SHMT2-234ENST00000557703 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
SHMT2-234ENST00000557703 PMCHL2Q9BQD1 86 aa8.6□□□□□ -1.03
SHMT2-234ENST00000557703 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
SHMT2-234ENST00000557703 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
SHMT2-234ENST00000557703 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
SHMT2-234ENST00000557703 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
SHMT2-234ENST00000557703 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-234ENST00000557703 PFN2P35080 140 aa8.57□□□□□ -1.04
SHMT2-234ENST00000557703 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
SHMT2-234ENST00000557703 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
SHMT2-234ENST00000557703 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
SHMT2-234ENST00000557703 LINC00158P58513 81 aa8.56□□□□□ -1.04
SHMT2-234ENST00000557703 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
SHMT2-234ENST00000557703 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
SHMT2-234ENST00000557703 FAT1Q14517 4588 aa8.56□□□□□ -1.04
SHMT2-234ENST00000557703 M0QXV9 152 aa8.55□□□□□ -1.04
SHMT2-234ENST00000557703 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
SHMT2-234ENST00000557703 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
SHMT2-234ENST00000557703 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-234ENST00000557703 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
SHMT2-234ENST00000557703 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
SHMT2-234ENST00000557703 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
SHMT2-234ENST00000557703 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-234ENST00000557703 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms