RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 UBE2AP49459 152 aa10.5□□□□□ -0.73
ABCD4-228ENST00000557588 S100A8P05109 93 aa10.49□□□□□ -0.73
ABCD4-228ENST00000557588 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
ABCD4-228ENST00000557588 ALKAL2Q6UX46 152 aa10.49□□□□□ -0.73
ABCD4-228ENST00000557588 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
ABCD4-228ENST00000557588 AMELXQ99217 191 aa10.49□□□□□ -0.73
ABCD4-228ENST00000557588 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
ABCD4-228ENST00000557588 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
ABCD4-228ENST00000557588 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
ABCD4-228ENST00000557588 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
ABCD4-228ENST00000557588 ZC2HC1BQ5TFG8 222 aa10.48□□□□□ -0.73
ABCD4-228ENST00000557588 GAGE10A6NGK3 116 aa10.47□□□□□ -0.73
ABCD4-228ENST00000557588 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
ABCD4-228ENST00000557588 CXCL5P42830 114 aa10.46□□□□□ -0.73
ABCD4-228ENST00000557588 PNRC1Q12796 327 aaPredicted RBP10.46□□□□□ -0.73
ABCD4-228ENST00000557588 MRPL54Q6P161 138 aaKnown RBP10.46□□□□□ -0.73
ABCD4-228ENST00000557588 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.73
ABCD4-228ENST00000557588 NPSP0C0P6 89 aa10.45□□□□□ -0.74
ABCD4-228ENST00000557588 ADIRFQ15847 76 aa10.45□□□□□ -0.74
ABCD4-228ENST00000557588 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
ABCD4-228ENST00000557588 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
ABCD4-228ENST00000557588 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
ABCD4-228ENST00000557588 VCX2Q9H322 139 aa10.44□□□□□ -0.74
ABCD4-228ENST00000557588 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
ABCD4-228ENST00000557588 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
ABCD4-228ENST00000557588 HERVK_113P63121 156 aa10.43□□□□□ -0.74
ABCD4-228ENST00000557588 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
ABCD4-228ENST00000557588 KRTAP4-1Q9BYQ7 146 aa10.43□□□□□ -0.74
ABCD4-228ENST00000557588 SEC11AP67812 179 aa10.42□□□□□ -0.74
ABCD4-228ENST00000557588 PRLHP81277 87 aa10.42□□□□□ -0.74
ABCD4-228ENST00000557588 TMEM136Q6ZRR5 245 aa10.42□□□□□ -0.74
ABCD4-228ENST00000557588 NKAPP1Q8N9T2 125 aa10.42□□□□□ -0.74
ABCD4-228ENST00000557588 NAT8Q9UHE5 227 aa10.41□□□□□ -0.74
ABCD4-228ENST00000557588 IGKV2-28A0A075B6P5 120 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 IGKV2D-28P01615 120 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 SRSF3P84103 164 aaKnown RBP10.4□□□□□ -0.74
ABCD4-228ENST00000557588 SPAG11AQ6PDA7 123 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 LAMTOR2Q9Y2Q5 125 aa10.4□□□□□ -0.74
ABCD4-228ENST00000557588 LOC389332A0A1B0GUA5 103 aa10.38□□□□□ -0.75
ABCD4-228ENST00000557588 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
ABCD4-228ENST00000557588 ATP5L2Q7Z4Y8 100 aa10.38□□□□□ -0.75
ABCD4-228ENST00000557588 MAP1LC3AQ9H492 121 aa10.38□□□□□ -0.75
ABCD4-228ENST00000557588 GEMIN7Q9H840 131 aaKnown RBP10.38□□□□□ -0.75
ABCD4-228ENST00000557588 ORMDL2Q53FV1 153 aa10.37□□□□□ -0.75
ABCD4-228ENST00000557588 Q8N8P6 123 aa10.37□□□□□ -0.75
ABCD4-228ENST00000557588 SCO1O75880 301 aa10.36□□□□□ -0.75
ABCD4-228ENST00000557588 SEC61BP60468 96 aaKnown RBP10.36□□□□□ -0.75
ABCD4-228ENST00000557588 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
ABCD4-228ENST00000557588 TMEM126AQ9H061 195 aa10.36□□□□□ -0.75
ABCD4-228ENST00000557588 K7EMI3 77 aa10.35□□□□□ -0.75
ABCD4-228ENST00000557588 PAPPA-AS1Q5QFB9 102 aa10.35□□□□□ -0.75
ABCD4-228ENST00000557588 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
ABCD4-228ENST00000557588 COX7B2Q8TF08 81 aa10.35□□□□□ -0.75
ABCD4-228ENST00000557588 PDZD11Q5EBL8 140 aa10.34□□□□□ -0.75
ABCD4-228ENST00000557588 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
ABCD4-228ENST00000557588 C9JQL5 133 aa10.33□□□□□ -0.76
ABCD4-228ENST00000557588 TIMM17AQ99595 171 aa10.33□□□□□ -0.76
ABCD4-228ENST00000557588 RAB5BP61020 215 aa10.32□□□□□ -0.76
ABCD4-228ENST00000557588 GNB1LQ9BYB4 327 aa10.32□□□□□ -0.76
ABCD4-228ENST00000557588 IGLV5-45A0A087WSX0 123 aa10.31□□□□□ -0.76
ABCD4-228ENST00000557588 M0R378 163 aa10.31□□□□□ -0.76
ABCD4-228ENST00000557588 VPREB1P12018 145 aa10.3□□□□□ -0.76
ABCD4-228ENST00000557588 LCE2CQ5TA81 110 aa10.3□□□□□ -0.76
ABCD4-228ENST00000557588 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
ABCD4-228ENST00000557588 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
ABCD4-228ENST00000557588 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
ABCD4-228ENST00000557588 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
ABCD4-228ENST00000557588 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
ABCD4-228ENST00000557588 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
ABCD4-228ENST00000557588 HIGD2AQ9BW72 106 aa10.27□□□□□ -0.77
ABCD4-228ENST00000557588 ATP5LO75964 103 aa10.26□□□□□ -0.77
ABCD4-228ENST00000557588 G0S2P27469 103 aa10.26□□□□□ -0.77
ABCD4-228ENST00000557588 Q8NBF4 154 aa10.26□□□□□ -0.77
ABCD4-228ENST00000557588 SPINK8P0C7L1 97 aa10.25□□□□□ -0.77
ABCD4-228ENST00000557588 SPINK1P00995 79 aa10.24□□□□□ -0.77
ABCD4-228ENST00000557588 ERASQ7Z444 233 aa10.24□□□□□ -0.77
ABCD4-228ENST00000557588 AKAP14Q86UN6 197 aa10.24□□□□□ -0.77
ABCD4-228ENST00000557588 DAND5Q8N907 189 aa10.24□□□□□ -0.77
ABCD4-228ENST00000557588 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
ABCD4-228ENST00000557588 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
ABCD4-228ENST00000557588 PEA15Q15121 130 aa10.23□□□□□ -0.77
ABCD4-228ENST00000557588 ZNF706Q9Y5V0 76 aaPredicted RBP10.23□□□□□ -0.77
ABCD4-228ENST00000557588 PFN2P35080 140 aa10.22□□□□□ -0.77
ABCD4-228ENST00000557588 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
ABCD4-228ENST00000557588 XP32Q5T750 250 aa10.22□□□□□ -0.77
ABCD4-228ENST00000557588 Q8NDZ9 215 aa10.22□□□□□ -0.77
ABCD4-228ENST00000557588 MT1HP80294 61 aa10.21□□□□□ -0.77
ABCD4-228ENST00000557588 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.77
ABCD4-228ENST00000557588 A0A1B0GVG6 124 aa10.2□□□□□ -0.78
ABCD4-228ENST00000557588 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
ABCD4-228ENST00000557588 SCGB3A1Q96QR1 104 aa10.2□□□□□ -0.78
ABCD4-228ENST00000557588 ADCYAP1P18509 176 aa10.19□□□□□ -0.78
ABCD4-228ENST00000557588 MRPL18Q9H0U6 180 aaKnown RBP10.19□□□□□ -0.78
ABCD4-228ENST00000557588 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
ABCD4-228ENST00000557588 ERG28Q9UKR5 140 aa10.19□□□□□ -0.78
ABCD4-228ENST00000557588 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
ABCD4-228ENST00000557588 FAM19A2Q8N3H0 131 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms