RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-211	ENST00000557446	CHCHD1	Q96BP2	118 aa	Known RBP	12.41	□□□□□ -0.42
HIF1A-211	ENST00000557446	SMIM1	B2RUZ4	78 aa		12.4	□□□□□ -0.42
HIF1A-211	ENST00000557446	ATP5L	O75964	103 aa		12.4	□□□□□ -0.42
HIF1A-211	ENST00000557446	CKS1B	P61024	79 aa		12.4	□□□□□ -0.42
HIF1A-211	ENST00000557446	C6orf226	Q5I0X4	101 aa		12.4	□□□□□ -0.42
HIF1A-211	ENST00000557446	FLG2	Q5D862	2391 aa	Predicted RBP	12.4	□□□□□ -0.43
HIF1A-211	ENST00000557446		Q6ZRP5	223 aa		12.39	□□□□□ -0.43
HIF1A-211	ENST00000557446	C9orf116	Q5BN46	136 aa	Predicted RBP	12.38	□□□□□ -0.43
HIF1A-211	ENST00000557446		A0A1W2PNN7	141 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	SPINK8	P0C7L1	97 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	IGLC3	P0DOY3	106 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	HNRNPA3	P51991	378 aa	Known RBP	12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	GAGE2E	Q4V326	116 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	BAGE3	Q86Y29	109 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	GAGE2D	Q9UEU5	116 aa		12.37	□□□□□ -0.43
HIF1A-211	ENST00000557446	COLCA2	A8K830	154 aa		12.36	□□□□□ -0.43
HIF1A-211	ENST00000557446	HSBP1	O75506	76 aa		12.36	□□□□□ -0.43
HIF1A-211	ENST00000557446	CXCL5	P42830	114 aa		12.36	□□□□□ -0.43
HIF1A-211	ENST00000557446	NDUFC2-KCTD14	E9PQ53	114 aa		12.35	□□□□□ -0.43
HIF1A-211	ENST00000557446		H3BRM9	83 aa		12.35	□□□□□ -0.43
HIF1A-211	ENST00000557446	COX7B2	Q8TF08	81 aa		12.35	□□□□□ -0.43
HIF1A-211	ENST00000557446		F8VRH5	84 aa		12.34	□□□□□ -0.43
HIF1A-211	ENST00000557446	ZNF22	P17026	224 aa	Predicted RBP	12.33	□□□□□ -0.44
HIF1A-211	ENST00000557446	PRR3	P79522	188 aa	Known RBP	12.33	□□□□□ -0.44
HIF1A-211	ENST00000557446	SCO1	O75880	301 aa		12.32	□□□□□ -0.44
HIF1A-211	ENST00000557446	FAM19A2	Q8N3H0	131 aa		12.32	□□□□□ -0.44
HIF1A-211	ENST00000557446	IFI27L1	Q96BM0	104 aa		12.32	□□□□□ -0.44
HIF1A-211	ENST00000557446	MYCBP2	O75592	4640 aa		12.31	□□□□□ -0.44
HIF1A-211	ENST00000557446	FAM168B	A1KXE4	195 aa		12.31	□□□□□ -0.44
HIF1A-211	ENST00000557446	C11orf86	A6NJI1	115 aa		12.31	□□□□□ -0.44
HIF1A-211	ENST00000557446	SERF1A	O75920	110 aa		12.3	□□□□□ -0.44
HIF1A-211	ENST00000557446	LINC00310	P59036	64 aa		12.3	□□□□□ -0.44
HIF1A-211	ENST00000557446	PHF5A	Q7RTV0	110 aa	Known RBP	12.3	□□□□□ -0.44
HIF1A-211	ENST00000557446	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	12.3	□□□□□ -0.44
HIF1A-211	ENST00000557446	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.3	□□□□□ -0.44
HIF1A-211	ENST00000557446	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.29	□□□□□ -0.44
HIF1A-211	ENST00000557446		J3QL48	77 aa		12.28	□□□□□ -0.44
HIF1A-211	ENST00000557446	C9orf129	Q5T035	196 aa	Known RBP	12.28	□□□□□ -0.44
HIF1A-211	ENST00000557446	TMEM170B	Q5T4T1	132 aa		12.28	□□□□□ -0.44
HIF1A-211	ENST00000557446	TRAV12-1	A0A0B4J245	112 aa		12.27	□□□□□ -0.45
HIF1A-211	ENST00000557446	IGLV5-39	A0A0G2JS06	123 aa		12.27	□□□□□ -0.45
HIF1A-211	ENST00000557446	KRTAP7-1	Q8IUC3	87 aa		12.25	□□□□□ -0.45
HIF1A-211	ENST00000557446	XAGE1A	Q9HD64	81 aa		12.25	□□□□□ -0.45
HIF1A-211	ENST00000557446		M0QXV9	152 aa		12.24	□□□□□ -0.45
HIF1A-211	ENST00000557446	LEPROTL1	O95214	131 aa		12.24	□□□□□ -0.45
HIF1A-211	ENST00000557446	PKHD1L1	Q86WI1	4243 aa		12.23	□□□□□ -0.45
HIF1A-211	ENST00000557446	NUPR1	O60356	82 aa		12.23	□□□□□ -0.45
HIF1A-211	ENST00000557446	OXT	P01178	125 aa		12.23	□□□□□ -0.45
HIF1A-211	ENST00000557446		H0Y8G0	127 aa		12.22	□□□□□ -0.45
HIF1A-211	ENST00000557446	PSORS1C2	Q9UIG4	136 aa		12.22	□□□□□ -0.45
HIF1A-211	ENST00000557446	SERTAD4-AS1	Q5TG53	156 aa		12.2	□□□□□ -0.46
HIF1A-211	ENST00000557446	DMBT1	Q9UGM3	2413 aa	Predicted RBP	12.19	□□□□□ -0.46
HIF1A-211	ENST00000557446	TMEM223	A0PJW6	202 aa		12.19	□□□□□ -0.46
HIF1A-211	ENST00000557446	ODF1	Q14990	250 aa		12.19	□□□□□ -0.46
HIF1A-211	ENST00000557446	HSPB8	Q9UJY1	196 aa		12.19	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BK	O60814	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BJ	P06899	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	FABP4	P15090	132 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BO	P23527	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BB	P33778	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BD	P58876	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BC	P62807	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	UBE2B	P63146	152 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST2H2BE	Q16778	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	C1orf137	Q5JT78	98 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	KRTAP11-1	Q8IUC1	163 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BH	Q93079	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BN	Q99877	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	HIST1H2BM	Q99879	126 aa		12.18	□□□□□ -0.46
HIF1A-211	ENST00000557446	PFN2	P35080	140 aa		12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	SFTA2	Q6UW10	78 aa		12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	SPINK6	Q6UWN8	80 aa		12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	ZNF625	Q96I27	306 aa	Predicted RBP	12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	ERG28	Q9UKR5	140 aa		12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	LRP1	Q07954	4544 aa	Known RBP	12.16	□□□□□ -0.46
HIF1A-211	ENST00000557446	C22orf24	Q9Y442	160 aa		12.15	□□□□□ -0.46
HIF1A-211	ENST00000557446	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.14	□□□□□ -0.47	1e-8	■□□□□ 9.1
HIF1A-211	ENST00000557446	FAT3	Q8TDW7	4589 aa		12.13	□□□□□ -0.47
HIF1A-211	ENST00000557446	PLN	P26678	52 aa		12.12	□□□□□ -0.47
HIF1A-211	ENST00000557446	COX17	Q14061	63 aa		12.11	□□□□□ -0.47
HIF1A-211	ENST00000557446	LBH	Q53QV2	105 aa	Predicted RBP	12.11	□□□□□ -0.47
HIF1A-211	ENST00000557446	TP73-AS1	Q9UF72	201 aa		12.11	□□□□□ -0.47
HIF1A-211	ENST00000557446	PLA2G2D	Q9UNK4	145 aa		12.11	□□□□□ -0.47
HIF1A-211	ENST00000557446	IGLV7-43	P04211	117 aa		12.1	□□□□□ -0.47
HIF1A-211	ENST00000557446	MRPL55	Q7Z7F7	128 aa	Known RBP	12.1	□□□□□ -0.47
HIF1A-211	ENST00000557446	PMCHL2	Q9BQD1	86 aa		12.1	□□□□□ -0.47
HIF1A-211	ENST00000557446	MAP1LC3C	Q9BXW4	147 aa		12.1	□□□□□ -0.47
HIF1A-211	ENST00000557446	DPM2	O94777	84 aa		12.09	□□□□□ -0.47
HIF1A-211	ENST00000557446	REG3G	Q6UW15	175 aa		12.09	□□□□□ -0.47
HIF1A-211	ENST00000557446	SND1-IT1	Q9HBX3	110 aa		12.09	□□□□□ -0.47
HIF1A-211	ENST00000557446	MT1HL1	P0DM35	61 aa		12.08	□□□□□ -0.48
HIF1A-211	ENST00000557446	IGLV5-37	A0A075B6J1	123 aa		12.07	□□□□□ -0.48
HIF1A-211	ENST00000557446	HERC1	Q15751	4861 aa		12.07	□□□□□ -0.48
HIF1A-211	ENST00000557446	NKAPP1	Q8N9T2	125 aa		12.07	□□□□□ -0.48
HIF1A-211	ENST00000557446	IGKC	P01834	107 aa		12.06	□□□□□ -0.48
HIF1A-211	ENST00000557446		A0A0U1RRA0	63 aa		12.05	□□□□□ -0.48
HIF1A-211	ENST00000557446	S100A1	P23297	94 aa		12.05	□□□□□ -0.48
HIF1A-211	ENST00000557446	LINC00158	P58513	81 aa		12.05	□□□□□ -0.48
HIF1A-211	ENST00000557446	HERVK_113	P61574	105 aa		12.05	□□□□□ -0.48

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