RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 CHCHD1Q96BP2 118 aaKnown RBP12.41□□□□□ -0.42
HIF1A-211ENST00000557446 SMIM1B2RUZ4 78 aa12.4□□□□□ -0.42
HIF1A-211ENST00000557446 ATP5LO75964 103 aa12.4□□□□□ -0.42
HIF1A-211ENST00000557446 CKS1BP61024 79 aa12.4□□□□□ -0.42
HIF1A-211ENST00000557446 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
HIF1A-211ENST00000557446 FLG2Q5D862 2391 aaPredicted RBP12.4□□□□□ -0.43
HIF1A-211ENST00000557446 Q6ZRP5 223 aa12.39□□□□□ -0.43
HIF1A-211ENST00000557446 C9orf116Q5BN46 136 aaPredicted RBP12.38□□□□□ -0.43
HIF1A-211ENST00000557446 A0A1W2PNN7 141 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
HIF1A-211ENST00000557446 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 BAGE3Q86Y29 109 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
HIF1A-211ENST00000557446 COLCA2A8K830 154 aa12.36□□□□□ -0.43
HIF1A-211ENST00000557446 HSBP1O75506 76 aa12.36□□□□□ -0.43
HIF1A-211ENST00000557446 CXCL5P42830 114 aa12.36□□□□□ -0.43
HIF1A-211ENST00000557446 NDUFC2-KCTD14E9PQ53 114 aa12.35□□□□□ -0.43
HIF1A-211ENST00000557446 H3BRM9 83 aa12.35□□□□□ -0.43
HIF1A-211ENST00000557446 COX7B2Q8TF08 81 aa12.35□□□□□ -0.43
HIF1A-211ENST00000557446 F8VRH5 84 aa12.34□□□□□ -0.43
HIF1A-211ENST00000557446 ZNF22P17026 224 aaPredicted RBP12.33□□□□□ -0.44
HIF1A-211ENST00000557446 PRR3P79522 188 aaKnown RBP12.33□□□□□ -0.44
HIF1A-211ENST00000557446 SCO1O75880 301 aa12.32□□□□□ -0.44
HIF1A-211ENST00000557446 FAM19A2Q8N3H0 131 aa12.32□□□□□ -0.44
HIF1A-211ENST00000557446 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
HIF1A-211ENST00000557446 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
HIF1A-211ENST00000557446 FAM168BA1KXE4 195 aa12.31□□□□□ -0.44
HIF1A-211ENST00000557446 C11orf86A6NJI1 115 aa12.31□□□□□ -0.44
HIF1A-211ENST00000557446 SERF1AO75920 110 aa12.3□□□□□ -0.44
HIF1A-211ENST00000557446 LINC00310P59036 64 aa12.3□□□□□ -0.44
HIF1A-211ENST00000557446 PHF5AQ7RTV0 110 aaKnown RBP12.3□□□□□ -0.44
HIF1A-211ENST00000557446 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
HIF1A-211ENST00000557446 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
HIF1A-211ENST00000557446 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
HIF1A-211ENST00000557446 J3QL48 77 aa12.28□□□□□ -0.44
HIF1A-211ENST00000557446 C9orf129Q5T035 196 aaKnown RBP12.28□□□□□ -0.44
HIF1A-211ENST00000557446 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
HIF1A-211ENST00000557446 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
HIF1A-211ENST00000557446 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.45
HIF1A-211ENST00000557446 KRTAP7-1Q8IUC3 87 aa12.25□□□□□ -0.45
HIF1A-211ENST00000557446 XAGE1AQ9HD64 81 aa12.25□□□□□ -0.45
HIF1A-211ENST00000557446 M0QXV9 152 aa12.24□□□□□ -0.45
HIF1A-211ENST00000557446 LEPROTL1O95214 131 aa12.24□□□□□ -0.45
HIF1A-211ENST00000557446 PKHD1L1Q86WI1 4243 aa12.23□□□□□ -0.45
HIF1A-211ENST00000557446 NUPR1O60356 82 aa12.23□□□□□ -0.45
HIF1A-211ENST00000557446 OXTP01178 125 aa12.23□□□□□ -0.45
HIF1A-211ENST00000557446 H0Y8G0 127 aa12.22□□□□□ -0.45
HIF1A-211ENST00000557446 PSORS1C2Q9UIG4 136 aa12.22□□□□□ -0.45
HIF1A-211ENST00000557446 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
HIF1A-211ENST00000557446 DMBT1Q9UGM3 2413 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-211ENST00000557446 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
HIF1A-211ENST00000557446 ODF1Q14990 250 aa12.19□□□□□ -0.46
HIF1A-211ENST00000557446 HSPB8Q9UJY1 196 aa12.19□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 FABP4P15090 132 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 UBE2BP63146 152 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-211ENST00000557446 KRTAP11-1Q8IUC1 163 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
HIF1A-211ENST00000557446 PFN2P35080 140 aa12.16□□□□□ -0.46
HIF1A-211ENST00000557446 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
HIF1A-211ENST00000557446 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
HIF1A-211ENST00000557446 ZNF625Q96I27 306 aaPredicted RBP12.16□□□□□ -0.46
HIF1A-211ENST00000557446 ERG28Q9UKR5 140 aa12.16□□□□□ -0.46
HIF1A-211ENST00000557446 LRP1Q07954 4544 aaKnown RBP12.16□□□□□ -0.46
HIF1A-211ENST00000557446 C22orf24Q9Y442 160 aa12.15□□□□□ -0.46
HIF1A-211ENST00000557446 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.471e-8■□□□□ 9.1
HIF1A-211ENST00000557446 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
HIF1A-211ENST00000557446 PLNP26678 52 aa12.12□□□□□ -0.47
HIF1A-211ENST00000557446 COX17Q14061 63 aa12.11□□□□□ -0.47
HIF1A-211ENST00000557446 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
HIF1A-211ENST00000557446 TP73-AS1Q9UF72 201 aa12.11□□□□□ -0.47
HIF1A-211ENST00000557446 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
HIF1A-211ENST00000557446 IGLV7-43P04211 117 aa12.1□□□□□ -0.47
HIF1A-211ENST00000557446 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
HIF1A-211ENST00000557446 PMCHL2Q9BQD1 86 aa12.1□□□□□ -0.47
HIF1A-211ENST00000557446 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
HIF1A-211ENST00000557446 DPM2O94777 84 aa12.09□□□□□ -0.47
HIF1A-211ENST00000557446 REG3GQ6UW15 175 aa12.09□□□□□ -0.47
HIF1A-211ENST00000557446 SND1-IT1Q9HBX3 110 aa12.09□□□□□ -0.47
HIF1A-211ENST00000557446 MT1HL1P0DM35 61 aa12.08□□□□□ -0.48
HIF1A-211ENST00000557446 IGLV5-37A0A075B6J1 123 aa12.07□□□□□ -0.48
HIF1A-211ENST00000557446 HERC1Q15751 4861 aa12.07□□□□□ -0.48
HIF1A-211ENST00000557446 NKAPP1Q8N9T2 125 aa12.07□□□□□ -0.48
HIF1A-211ENST00000557446 IGKCP01834 107 aa12.06□□□□□ -0.48
HIF1A-211ENST00000557446 A0A0U1RRA0 63 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 S100A1P23297 94 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 LINC00158P58513 81 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 HERVK_113P61574 105 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms