RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TRAPPC1Q9Y5R8 145 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 SNAPINO95295 136 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 G0S2P27469 103 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 HERVK_113P63121 156 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 SRSF9Q13242 221 aaKnown RBP eCLIP5□□□□□ -1.61
VTI1B-206ENST00000556461 PMCHL1Q16048 86 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 PAPPA-AS1Q5QFB9 102 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 SVBPQ8N300 66 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 GEMIN7Q9H840 131 aaKnown RBP5□□□□□ -1.61
VTI1B-206ENST00000556461 PSORS1C2Q9UIG4 136 aa5□□□□□ -1.61
VTI1B-206ENST00000556461 TRBV30A0A0K0K1B3 111 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 ODF1Q14990 250 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 C9orf129Q5T035 196 aaKnown RBP4.99□□□□□ -1.61
VTI1B-206ENST00000556461 FAM19A5Q7Z5A7 132 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-206ENST00000556461 Q8IZM0 81 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 SMCO4Q9NRQ5 59 aa4.99□□□□□ -1.61
VTI1B-206ENST00000556461 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 NDUFC2-KCTD14E9PQ53 114 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 PRSS2P07478 247 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 LINC00614P0C842 121 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 SEC11AP67812 179 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 PMVKQ15126 192 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 NDUFA5Q16718 116 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 C6orf226Q5I0X4 101 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 CBLN2Q8IUK8 224 aa4.98□□□□□ -1.61
VTI1B-206ENST00000556461 PACRGQ96M98 296 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-206ENST00000556461 SPINK8P0C7L1 97 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 CKS1BP61024 79 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 PDZD11Q5EBL8 140 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 SERTAD4-AS1Q5TG53 156 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 SLC7A5P1Q8MH63 180 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
VTI1B-206ENST00000556461 LINC01549A6NIU2 74 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 F8VRH5 84 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 M0QXV9 152 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 HBDP02042 147 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 NDUFA6P56556 154 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 C1orf137Q5JT78 98 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 XAGE1AQ9HD64 81 aa4.96□□□□□ -1.62
VTI1B-206ENST00000556461 ZNF22P17026 224 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-206ENST00000556461 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
VTI1B-206ENST00000556461 IGLV7-43P04211 117 aa4.94□□□□□ -1.62
VTI1B-206ENST00000556461 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
VTI1B-206ENST00000556461 LRP2P98164 4655 aa4.94□□□□□ -1.62
VTI1B-206ENST00000556461 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
VTI1B-206ENST00000556461 CXCL5P42830 114 aa4.93□□□□□ -1.62
VTI1B-206ENST00000556461 RAB5BP61020 215 aa4.93□□□□□ -1.62
VTI1B-206ENST00000556461 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
VTI1B-206ENST00000556461 C22orf24Q9Y442 160 aa4.93□□□□□ -1.62
VTI1B-206ENST00000556461 H3BRM9 83 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 ATP5LO75964 103 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 TRGC2P03986 189 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 LINC00310P59036 64 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 UBE2BP63146 152 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 REG3GQ6UW15 175 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 PLA2G2DQ9UNK4 145 aa4.92□□□□□ -1.62
VTI1B-206ENST00000556461 LCE2BO14633 110 aa4.91□□□□□ -1.62
VTI1B-206ENST00000556461 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
VTI1B-206ENST00000556461 IFI27L1Q96BM0 104 aa4.91□□□□□ -1.62
VTI1B-206ENST00000556461 CHCHD1Q96BP2 118 aaKnown RBP4.91□□□□□ -1.62
VTI1B-206ENST00000556461 COLCA2A8K830 154 aa4.9□□□□□ -1.63
VTI1B-206ENST00000556461 SCO1O75880 301 aa4.9□□□□□ -1.63
VTI1B-206ENST00000556461 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
VTI1B-206ENST00000556461 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-206ENST00000556461 CHTOPQ9Y3Y2 248 aaKnown RBP4.9□□□□□ -1.63
VTI1B-206ENST00000556461 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 H0Y9J4 135 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 NUPR1O60356 82 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 KRTAP1-4P0C5Y4 121 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 PFN2P35080 140 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 MRPL55Q7Z7F7 128 aaKnown RBP4.89□□□□□ -1.63
VTI1B-206ENST00000556461 Q8NDZ9 215 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 DIRC1Q969H9 104 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 LINC00167Q96N53 147 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 TP73-AS1Q9UF72 201 aa4.89□□□□□ -1.63
VTI1B-206ENST00000556461 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 TRAV12-1A0A0B4J245 112 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 RPL37AP8A6NKH3 93 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 HSBP1O75506 76 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 SERF1AO75920 110 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 LBHQ53QV2 105 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-206ENST00000556461 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 ERG28Q9UKR5 140 aa4.88□□□□□ -1.63
VTI1B-206ENST00000556461 LPAP08519 4548 aa4.87□□□□□ -1.63
VTI1B-206ENST00000556461 SND1-IT1Q9HBX3 110 aa4.87□□□□□ -1.63
VTI1B-206ENST00000556461 H0Y8G0 127 aa4.86□□□□□ -1.63
VTI1B-206ENST00000556461 ZNF861PO60384 105 aa4.86□□□□□ -1.63
VTI1B-206ENST00000556461 VPREB1P12018 145 aa4.86□□□□□ -1.63
VTI1B-206ENST00000556461 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
VTI1B-206ENST00000556461 BCE1O60756 84 aa4.85□□□□□ -1.63
VTI1B-206ENST00000556461 IGKV2-28A0A075B6P5 120 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 LEPROTL1O95214 131 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms