RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 Q8IZM0 81 aa8.37□□□□□ -1.07
SRSF5-214ENST00000556436 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
SRSF5-214ENST00000556436 F8VRH5 84 aa8.36□□□□□ -1.07
SRSF5-214ENST00000556436 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
SRSF5-214ENST00000556436 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 F8WDY8 70 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 H3BRM9 83 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 PRSS2P07478 247 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 CIRBP-AS1Q8TBR5 109 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 COX7B2Q8TF08 81 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
SRSF5-214ENST00000556436 RNF151Q2KHN1 245 aa8.34□□□□□ -1.07
SRSF5-214ENST00000556436 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
SRSF5-214ENST00000556436 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
SRSF5-214ENST00000556436 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
SRSF5-214ENST00000556436 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
SRSF5-214ENST00000556436 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
SRSF5-214ENST00000556436 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
SRSF5-214ENST00000556436 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
SRSF5-214ENST00000556436 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
SRSF5-214ENST00000556436 CKS1BP61024 79 aa8.32□□□□□ -1.08
SRSF5-214ENST00000556436 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
SRSF5-214ENST00000556436 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SRSF5-214ENST00000556436 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 A0A087WYN8 130 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 Q6ZRP5 223 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
SRSF5-214ENST00000556436 DPM2O94777 84 aa8.3□□□□□ -1.08
SRSF5-214ENST00000556436 CXCL5P42830 114 aa8.3□□□□□ -1.08
SRSF5-214ENST00000556436 Q8N1X5 172 aa8.3□□□□□ -1.08
SRSF5-214ENST00000556436 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
SRSF5-214ENST00000556436 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
SRSF5-214ENST00000556436 C3orf79P0CE67 100 aa8.29□□□□□ -1.08
SRSF5-214ENST00000556436 PLNP26678 52 aa8.29□□□□□ -1.08
SRSF5-214ENST00000556436 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
SRSF5-214ENST00000556436 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
SRSF5-214ENST00000556436 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
SRSF5-214ENST00000556436 STPG4Q8N801 248 aa8.28□□□□□ -1.08
SRSF5-214ENST00000556436 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 IGKCP01834 107 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 KRTDAPP60985 99 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 Q5VSD8 79 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SRSF5-214ENST00000556436 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
SRSF5-214ENST00000556436 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
SRSF5-214ENST00000556436 DPH3Q96FX2 82 aa8.26□□□□□ -1.09
SRSF5-214ENST00000556436 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
SRSF5-214ENST00000556436 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
SRSF5-214ENST00000556436 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
SRSF5-214ENST00000556436 SRRM2Q9UQ35 2752 aaKnown RBP8.25□□□□□ -1.09
SRSF5-214ENST00000556436 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
SRSF5-214ENST00000556436 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
SRSF5-214ENST00000556436 S100A6P06703 90 aa8.24□□□□□ -1.09
SRSF5-214ENST00000556436 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
SRSF5-214ENST00000556436 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
SRSF5-214ENST00000556436 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
SRSF5-214ENST00000556436 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
SRSF5-214ENST00000556436 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
SRSF5-214ENST00000556436 LEPROTO15243 131 aa8.22□□□□□ -1.09
SRSF5-214ENST00000556436 S100A2P29034 98 aa8.22□□□□□ -1.09
SRSF5-214ENST00000556436 ERG28Q9UKR5 140 aa8.22□□□□□ -1.09
SRSF5-214ENST00000556436 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 PFN2P35080 140 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 HERVK_113P61574 105 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
SRSF5-214ENST00000556436 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
SRSF5-214ENST00000556436 FAM229AH3BQW9 127 aa8.2□□□□□ -1.1
SRSF5-214ENST00000556436 J3QQQ9 107 aa8.2□□□□□ -1.1
SRSF5-214ENST00000556436 SERTAD4-AS1Q5TG53 156 aa8.2□□□□□ -1.1
SRSF5-214ENST00000556436 E9PLD3 99 aa8.19□□□□□ -1.1
SRSF5-214ENST00000556436 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
SRSF5-214ENST00000556436 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
SRSF5-214ENST00000556436 ATOH7Q8N100 152 aa8.19□□□□□ -1.1
SRSF5-214ENST00000556436 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
SRSF5-214ENST00000556436 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
SRSF5-214ENST00000556436 C20orf202A1L168 122 aa8.18□□□□□ -1.1
SRSF5-214ENST00000556436 RPL37AP61513 92 aaKnown RBP8.18□□□□□ -1.1
SRSF5-214ENST00000556436 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
SRSF5-214ENST00000556436 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
SRSF5-214ENST00000556436 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
SRSF5-214ENST00000556436 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
SRSF5-214ENST00000556436 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
SRSF5-214ENST00000556436 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
SRSF5-214ENST00000556436 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
SRSF5-214ENST00000556436 M0QXV9 152 aa8.16□□□□□ -1.1
SRSF5-214ENST00000556436 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
SRSF5-214ENST00000556436 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
SRSF5-214ENST00000556436 HERV-K104P63124 156 aa8.16□□□□□ -1.1
SRSF5-214ENST00000556436 HNRNPA3P51991 378 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms