RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
ACTN1-218ENST00000556343 PKIGQ9Y2B9 76 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
ACTN1-218ENST00000556343 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
ACTN1-218ENST00000556343 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
ACTN1-218ENST00000556343 Q6ZRN7 208 aaPredicted RBP6.08□□□□□ -1.44
ACTN1-218ENST00000556343 PCP2Q8IVA1 136 aa6.08□□□□□ -1.44
ACTN1-218ENST00000556343 MAPKAPK5-AS1Q8N8E1 139 aa6.08□□□□□ -1.44
ACTN1-218ENST00000556343 TMEM238C9JI98 176 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 LECT2O14960 151 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 TSPEAR-AS2P59090 65 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 COX17Q14061 63 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 LINC00336Q6ZUF6 198 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 COPS9Q8WXC6 57 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 ZNF625Q96I27 306 aaPredicted RBP6.07□□□□□ -1.44
ACTN1-218ENST00000556343 CARD19Q96LW7 228 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
ACTN1-218ENST00000556343 A0A087WTM6 91 aa6.06□□□□□ -1.44
ACTN1-218ENST00000556343 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
ACTN1-218ENST00000556343 TIMM17BO60830 172 aa6.06□□□□□ -1.44
ACTN1-218ENST00000556343 Q6ZVH6 145 aa6.06□□□□□ -1.44
ACTN1-218ENST00000556343 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
ACTN1-218ENST00000556343 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 HNRNPA3P51991 378 aaKnown RBP6.05□□□□□ -1.44
ACTN1-218ENST00000556343 LINC00158P58513 81 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
ACTN1-218ENST00000556343 C2orf82Q6UX34 121 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 UNQ6190/PRO20217Q6UXQ8 127 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 Q8N814 137 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 HIGD1BQ9P298 99 aa6.05□□□□□ -1.44
ACTN1-218ENST00000556343 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
ACTN1-218ENST00000556343 Q6ZRU5 148 aa6.04□□□□□ -1.44
ACTN1-218ENST00000556343 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
ACTN1-218ENST00000556343 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
ACTN1-218ENST00000556343 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
ACTN1-218ENST00000556343 SACSQ9NZJ4 4579 aa6.03□□□□□ -1.44
ACTN1-218ENST00000556343 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
ACTN1-218ENST00000556343 PFN2P35080 140 aa6.03□□□□□ -1.44
ACTN1-218ENST00000556343 HIST1H4GQ99525 98 aa6.03□□□□□ -1.44
ACTN1-218ENST00000556343 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
ACTN1-218ENST00000556343 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.02□□□□□ -1.45
ACTN1-218ENST00000556343 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 RTL8CO15255 209 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 IFITM1P13164 125 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 WFDC2Q14508 124 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 TAL2Q16559 108 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 C10orf25Q5T742 122 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 SPANXB1Q9NS25 103 aaPredicted RBP6.02□□□□□ -1.45
ACTN1-218ENST00000556343 PGPEP1Q9NXJ5 209 aa6.02□□□□□ -1.45
ACTN1-218ENST00000556343 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 A0A0U1RRA0 63 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 TNP2Q05952 138 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 SPANXDQ9BXN6 97 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 SPANXCQ9NY87 97 aa6.01□□□□□ -1.45
ACTN1-218ENST00000556343 DDTP30046 118 aa6□□□□□ -1.45
ACTN1-218ENST00000556343 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
ACTN1-218ENST00000556343 HSD52Q0P140 79 aa6□□□□□ -1.45
ACTN1-218ENST00000556343 M0R143 59 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 SLPIP03973 132 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
ACTN1-218ENST00000556343 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
ACTN1-218ENST00000556343 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 C9orf163Q8N9P6 203 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 LINC00474Q9P2X8 69 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 TP73-AS1Q9UF72 201 aa5.99□□□□□ -1.45
ACTN1-218ENST00000556343 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 TMEM238LA0A1B0GVL6 79 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 A6NJY4 79 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 PTTG1IPP53801 180 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 CTAG1AP78358 180 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 GAGE2EQ4V326 116 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 GAGE2DQ9UEU5 116 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 DNAH17Q9UFH2 4485 aa5.98□□□□□ -1.45
ACTN1-218ENST00000556343 ADAMTSL4-AS1Q5T5F5 129 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 MUSTN1Q8IVN3 82 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 CEND1Q8N111 149 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 DPH3Q96FX2 82 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 LITAFQ99732 161 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
ACTN1-218ENST00000556343 PCP4L1A6NKN8 68 aa5.96□□□□□ -1.46
ACTN1-218ENST00000556343 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
ACTN1-218ENST00000556343 DAND5Q8N907 189 aa5.96□□□□□ -1.46
ACTN1-218ENST00000556343 SND1-IT1Q9HBX3 110 aa5.96□□□□□ -1.46
ACTN1-218ENST00000556343 LOC107984156A0A0G2JMH3 177 aa5.95□□□□□ -1.46
ACTN1-218ENST00000556343 NPC2P61916 151 aa5.95□□□□□ -1.46
ACTN1-218ENST00000556343 Q6ZRP5 223 aa5.95□□□□□ -1.46
ACTN1-218ENST00000556343 ARL17AQ8IVW1 177 aa5.95□□□□□ -1.46
ACTN1-218ENST00000556343 A6NDN8 102 aa5.94□□□□□ -1.46
ACTN1-218ENST00000556343 NDUFC2O95298 119 aa5.94□□□□□ -1.46
ACTN1-218ENST00000556343 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms