RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
LRP1-210ENST00000556247 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
LRP1-210ENST00000556247 TIMM17BO60830 172 aa11.34□□□□□ -0.59
LRP1-210ENST00000556247 TAL2Q16559 108 aa11.34□□□□□ -0.59
LRP1-210ENST00000556247 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
LRP1-210ENST00000556247 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
LRP1-210ENST00000556247 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
LRP1-210ENST00000556247 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
LRP1-210ENST00000556247 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
LRP1-210ENST00000556247 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
LRP1-210ENST00000556247 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
LRP1-210ENST00000556247 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
LRP1-210ENST00000556247 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
LRP1-210ENST00000556247 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 F8WDY8 70 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 M0R143 59 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 Q6ZR54 194 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
LRP1-210ENST00000556247 LECT2O14960 151 aa11.3□□□□□ -0.6
LRP1-210ENST00000556247 GCSHP23434 173 aa11.3□□□□□ -0.6
LRP1-210ENST00000556247 LINC00158P58513 81 aa11.3□□□□□ -0.6
LRP1-210ENST00000556247 LITAFQ99732 161 aa11.3□□□□□ -0.6
LRP1-210ENST00000556247 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
LRP1-210ENST00000556247 PFN2P35080 140 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 BATFQ16520 125 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 ADAMTSL4-AS1Q5T5F5 129 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 Q6ZVH6 145 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 CEND1Q8N111 149 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
LRP1-210ENST00000556247 BVES-AS1Q5T3Y7 98 aa11.28□□□□□ -0.6
LRP1-210ENST00000556247 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
LRP1-210ENST00000556247 PTTG1IPP53801 180 aa11.27□□□□□ -0.61
LRP1-210ENST00000556247 DNAH1Q9P2D7 4330 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 COX17Q14061 63 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 Q6ZRN7 208 aaPredicted RBP11.26□□□□□ -0.61
LRP1-210ENST00000556247 MUSTN1Q8IVN3 82 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 DAND5Q8N907 189 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 LYSTQ99698 3801 aa11.26□□□□□ -0.61
LRP1-210ENST00000556247 IFITM1P13164 125 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
LRP1-210ENST00000556247 C1orf134Q5TEV5 83 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 Q6ZRU5 148 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 COPS9Q8WXC6 57 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
LRP1-210ENST00000556247 NPC2P61916 151 aa11.24□□□□□ -0.61
LRP1-210ENST00000556247 WFDC2Q14508 124 aa11.24□□□□□ -0.61
LRP1-210ENST00000556247 EREGO14944 169 aa11.23□□□□□ -0.61
LRP1-210ENST00000556247 FXYD2P54710 66 aa11.23□□□□□ -0.61
LRP1-210ENST00000556247 LINC00308Q8TCZ7 52 aa11.23□□□□□ -0.61
LRP1-210ENST00000556247 ALMS1Q8TCU4 4167 aa11.23□□□□□ -0.61
LRP1-210ENST00000556247 TMEM238LA0A1B0GVL6 79 aa11.22□□□□□ -0.61
LRP1-210ENST00000556247 A6NJY4 79 aa11.22□□□□□ -0.61
LRP1-210ENST00000556247 RPL24P83731 157 aaKnown RBP11.22□□□□□ -0.61
LRP1-210ENST00000556247 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
LRP1-210ENST00000556247 LRCOL1A6NCL2 159 aa11.21□□□□□ -0.61
LRP1-210ENST00000556247 RNF151Q2KHN1 245 aa11.21□□□□□ -0.61
LRP1-210ENST00000556247 A6NDN8 102 aa11.2□□□□□ -0.62
LRP1-210ENST00000556247 SLPIP03973 132 aa11.19□□□□□ -0.62
LRP1-210ENST00000556247 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
LRP1-210ENST00000556247 A4D1N5 150 aa11.18□□□□□ -0.62
LRP1-210ENST00000556247 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
LRP1-210ENST00000556247 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
LRP1-210ENST00000556247 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
LRP1-210ENST00000556247 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
LRP1-210ENST00000556247 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
LRP1-210ENST00000556247 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.16□□□□□ -0.62
LRP1-210ENST00000556247 LCE6AA0A183 80 aa11.16□□□□□ -0.62
LRP1-210ENST00000556247 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
LRP1-210ENST00000556247 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
LRP1-210ENST00000556247 CNBPP62633 177 aaKnown RBP11.16□□□□□ -0.62
LRP1-210ENST00000556247 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
LRP1-210ENST00000556247 A0A087WTM6 91 aa11.15□□□□□ -0.62
LRP1-210ENST00000556247 LBHQ53QV2 105 aaPredicted RBP11.14□□□□□ -0.63
LRP1-210ENST00000556247 Q8N814 137 aa11.14□□□□□ -0.63
LRP1-210ENST00000556247 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
LRP1-210ENST00000556247 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
LRP1-210ENST00000556247 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 CFC1P0CG37 223 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
LRP1-210ENST00000556247 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
LRP1-210ENST00000556247 K7ERJ3 54 aa11.11□□□□□ -0.63
LRP1-210ENST00000556247 Q6ZRP5 223 aa11.11□□□□□ -0.63
LRP1-210ENST00000556247 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
LRP1-210ENST00000556247 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
LRP1-210ENST00000556247 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
LRP1-210ENST00000556247 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms