RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 LINC00526Q96FQ7 95 aa7.63□□□□□ -1.19
ACTN1-216ENST00000556083 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
ACTN1-216ENST00000556083 CXCL6P80162 114 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 Q6ZTC4 211 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 KIAA1549Q9HCM3 1950 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 HCFC1P51610 2035 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 M0R2N4 97 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 TP53AIP1Q9HCN2 124 aa7.62□□□□□ -1.19
ACTN1-216ENST00000556083 Q9BRP9 147 aa7.61□□□□□ -1.19
ACTN1-216ENST00000556083 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
ACTN1-216ENST00000556083 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
ACTN1-216ENST00000556083 PLXNB1O43157 2135 aa7.61□□□□□ -1.19
ACTN1-216ENST00000556083 DSCAML1Q8TD84 2053 aa7.61□□□□□ -1.19
ACTN1-216ENST00000556083 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 ESRGQ1W209 222 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 MYO9AB2RTY4 2548 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 ATG2AQ2TAZ0 1938 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 C2CD3Q4AC94 2353 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 FAM30AQ9NZY2 134 aa7.6□□□□□ -1.19
ACTN1-216ENST00000556083 H3BPC8 53 aa7.59□□□□□ -1.19
ACTN1-216ENST00000556083 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
ACTN1-216ENST00000556083 CDSNQ15517 529 aa7.58□□□□□ -1.2
ACTN1-216ENST00000556083 LINC00208Q96KT6 92 aa7.58□□□□□ -1.2
ACTN1-216ENST00000556083 TANC2Q9HCD6 1990 aa7.58□□□□□ -1.2
ACTN1-216ENST00000556083 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
ACTN1-216ENST00000556083 ABCA2Q9BZC7 2435 aa7.58□□□□□ -1.2
ACTN1-216ENST00000556083 XGP55808 180 aa7.57□□□□□ -1.2
ACTN1-216ENST00000556083 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
ACTN1-216ENST00000556083 KLK9Q2XQG4 91 aa7.57□□□□□ -1.2
ACTN1-216ENST00000556083 PCNX3Q9H6A9 2034 aa7.57□□□□□ -1.2
ACTN1-216ENST00000556083 ADAMTS20P59510 1910 aa7.57□□□□□ -1.2
ACTN1-216ENST00000556083 FASNP49327 2511 aaKnown RBP7.56□□□□□ -1.2
ACTN1-216ENST00000556083 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
ACTN1-216ENST00000556083 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
ACTN1-216ENST00000556083 LINC00310P59036 64 aa7.56□□□□□ -1.2
ACTN1-216ENST00000556083 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
ACTN1-216ENST00000556083 WDR87Q6ZQQ6 2873 aa7.56□□□□□ -1.2
ACTN1-216ENST00000556083 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 KRTAP10-9P60411 292 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 IGLV5-45A0A087WSX0 123 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 COX6A2Q02221 97 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 Q8N3U1 123 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 HCG22E2RYF7 251 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 C11orf72Q8NBR9 251 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 FAM19A4Q96LR4 140 aa7.55□□□□□ -1.2
ACTN1-216ENST00000556083 C1orf195Q5TG92 126 aa7.54□□□□□ -1.2
ACTN1-216ENST00000556083 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
ACTN1-216ENST00000556083 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
ACTN1-216ENST00000556083 PRRC2AP48634 2157 aaKnown RBP7.54□□□□□ -1.2
ACTN1-216ENST00000556083 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-216ENST00000556083 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
ACTN1-216ENST00000556083 A0A087WSZ3 146 aa7.53□□□□□ -1.2
ACTN1-216ENST00000556083 A0A1W2PPR1 153 aa7.53□□□□□ -1.2
ACTN1-216ENST00000556083 A0A096LNJ9 63 aa7.52□□□□□ -1.2
ACTN1-216ENST00000556083 IGHV6-1A0A0B4J1U7 121 aa7.52□□□□□ -1.2
ACTN1-216ENST00000556083 A0A0U1RQV1 116 aa7.52□□□□□ -1.2
ACTN1-216ENST00000556083 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-216ENST00000556083 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
ACTN1-216ENST00000556083 A0A087WYN8 130 aa7.52□□□□□ -1.21
ACTN1-216ENST00000556083 H0Y9P7 68 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 Q6ZRU5 148 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 DOPEY1Q5JWR5 2465 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
ACTN1-216ENST00000556083 PTPRSQ13332 1948 aa7.5□□□□□ -1.21
ACTN1-216ENST00000556083 ZFHX3Q15911 3703 aa7.5□□□□□ -1.21
ACTN1-216ENST00000556083 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
ACTN1-216ENST00000556083 TLN1Q9Y490 2541 aaKnown RBP7.5□□□□□ -1.21
ACTN1-216ENST00000556083 PRM2P04554 102 aa7.49□□□□□ -1.21
ACTN1-216ENST00000556083 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-216ENST00000556083 EML5Q05BV3 1969 aa7.47□□□□□ -1.21
ACTN1-216ENST00000556083 SMR3AQ99954 134 aa7.47□□□□□ -1.21
ACTN1-216ENST00000556083 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
ACTN1-216ENST00000556083 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
ACTN1-216ENST00000556083 ZFYVE26Q68DK2 2539 aa7.47□□□□□ -1.21
ACTN1-216ENST00000556083 Q6ZSN1 163 aa7.46□□□□□ -1.21
ACTN1-216ENST00000556083 EDN2P20800 178 aa7.46□□□□□ -1.22
ACTN1-216ENST00000556083 LINC00315P59091 139 aa7.46□□□□□ -1.22
ACTN1-216ENST00000556083 Q8NBF4 154 aa7.45□□□□□ -1.22
ACTN1-216ENST00000556083 ANKRD11Q6UB99 2663 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-216ENST00000556083 CENPFP49454 3210 aa7.45□□□□□ -1.22
ACTN1-216ENST00000556083 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
ACTN1-216ENST00000556083 ELOF1P60002 83 aaKnown RBP7.44□□□□□ -1.22
ACTN1-216ENST00000556083 Q6ZRP5 223 aa7.44□□□□□ -1.22
ACTN1-216ENST00000556083 ACYP2P14621 99 aa7.44□□□□□ -1.22
ACTN1-216ENST00000556083 MDFIQ99750 246 aa7.44□□□□□ -1.22
ACTN1-216ENST00000556083 CRYGAP11844 174 aa7.44□□□□□ -1.22
ACTN1-216ENST00000556083 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
ACTN1-216ENST00000556083 CPAMD8Q8IZJ3 1885 aa7.43□□□□□ -1.22
ACTN1-216ENST00000556083 C8orf87E5RJ46 101 aa7.43□□□□□ -1.22
ACTN1-216ENST00000556083 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
ACTN1-216ENST00000556083 PIEZO2Q9H5I5 2752 aa7.42□□□□□ -1.22
ACTN1-216ENST00000556083 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
ACTN1-216ENST00000556083 PRR4Q16378 134 aa7.42□□□□□ -1.22
ACTN1-216ENST00000556083 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
ACTN1-216ENST00000556083 ZNF462Q96JM2 2506 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms