RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 TIMM17AQ99595 171 aa10.49□□□□□ -0.73
GPHN-211ENST00000556020 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
GPHN-211ENST00000556020 SEC11AP67812 179 aa10.48□□□□□ -0.73
GPHN-211ENST00000556020 FAM19A3Q7Z5A8 133 aa10.48□□□□□ -0.73
GPHN-211ENST00000556020 Q8IZM0 81 aa10.48□□□□□ -0.73
GPHN-211ENST00000556020 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
GPHN-211ENST00000556020 COMMD7Q86VX2 200 aa10.47□□□□□ -0.73
GPHN-211ENST00000556020 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
GPHN-211ENST00000556020 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
GPHN-211ENST00000556020 ERASQ7Z444 233 aa10.46□□□□□ -0.73
GPHN-211ENST00000556020 GNB1LQ9BYB4 327 aa10.46□□□□□ -0.73
GPHN-211ENST00000556020 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
GPHN-211ENST00000556020 F8VRH5 84 aa10.43□□□□□ -0.74
GPHN-211ENST00000556020 H0Y9J4 135 aa10.43□□□□□ -0.74
GPHN-211ENST00000556020 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
GPHN-211ENST00000556020 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
GPHN-211ENST00000556020 MRPL18Q9H0U6 180 aaKnown RBP10.43□□□□□ -0.74
GPHN-211ENST00000556020 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
GPHN-211ENST00000556020 RPS10P5Q9NQ39 176 aa10.42□□□□□ -0.74
GPHN-211ENST00000556020 SMCO4Q9NRQ5 59 aa10.42□□□□□ -0.74
GPHN-211ENST00000556020 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
GPHN-211ENST00000556020 LRP2P98164 4655 aa10.41□□□□□ -0.74
GPHN-211ENST00000556020 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.74
GPHN-211ENST00000556020 COX19Q49B96 90 aa10.4□□□□□ -0.74
GPHN-211ENST00000556020 COX7B2Q8TF08 81 aa10.4□□□□□ -0.74
GPHN-211ENST00000556020 CST9LQ9H4G1 147 aa10.4□□□□□ -0.74
GPHN-211ENST00000556020 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
GPHN-211ENST00000556020 LINC01546A6NGU7 62 aa10.39□□□□□ -0.75
GPHN-211ENST00000556020 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
GPHN-211ENST00000556020 CXCL5P42830 114 aa10.39□□□□□ -0.75
GPHN-211ENST00000556020 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
GPHN-211ENST00000556020 PMVKQ15126 192 aa10.38□□□□□ -0.75
GPHN-211ENST00000556020 RHEBQ15382 184 aa10.38□□□□□ -0.75
GPHN-211ENST00000556020 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
GPHN-211ENST00000556020 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
GPHN-211ENST00000556020 NDUFA6P56556 154 aa10.36□□□□□ -0.75
GPHN-211ENST00000556020 RAB5BP61020 215 aa10.36□□□□□ -0.75
GPHN-211ENST00000556020 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
GPHN-211ENST00000556020 C10orf91Q5T1B1 145 aa10.36□□□□□ -0.75
GPHN-211ENST00000556020 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
GPHN-211ENST00000556020 KRTAP1-4P0C5Y4 121 aa10.34□□□□□ -0.75
GPHN-211ENST00000556020 MRPL55Q7Z7F7 128 aaKnown RBP10.34□□□□□ -0.75
GPHN-211ENST00000556020 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
GPHN-211ENST00000556020 IGLV1-50A0A075B6I6 118 aa10.33□□□□□ -0.76
GPHN-211ENST00000556020 H3BRM9 83 aa10.33□□□□□ -0.76
GPHN-211ENST00000556020 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
GPHN-211ENST00000556020 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
GPHN-211ENST00000556020 NUPR1O60356 82 aa10.32□□□□□ -0.76
GPHN-211ENST00000556020 ZNF861PO60384 105 aa10.32□□□□□ -0.76
GPHN-211ENST00000556020 PMCHL1Q16048 86 aa10.32□□□□□ -0.76
GPHN-211ENST00000556020 C18orf32Q8TCD1 76 aa10.31□□□□□ -0.76
GPHN-211ENST00000556020 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
GPHN-211ENST00000556020 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
GPHN-211ENST00000556020 A0A096LNJ9 63 aa10.3□□□□□ -0.76
GPHN-211ENST00000556020 ATP5LO75964 103 aa10.3□□□□□ -0.76
GPHN-211ENST00000556020 APOC3P02656 99 aa10.3□□□□□ -0.76
GPHN-211ENST00000556020 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
GPHN-211ENST00000556020 LINC00167Q96N53 147 aa10.3□□□□□ -0.76
GPHN-211ENST00000556020 RNF213Q63HN8 5207 aa10.29□□□□□ -0.76
GPHN-211ENST00000556020 LINC00614P0C842 121 aa10.29□□□□□ -0.76
GPHN-211ENST00000556020 PFN2P35080 140 aa10.29□□□□□ -0.76
GPHN-211ENST00000556020 HBDP02042 147 aa10.28□□□□□ -0.76
GPHN-211ENST00000556020 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
GPHN-211ENST00000556020 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
GPHN-211ENST00000556020 BCE1O60756 84 aa10.27□□□□□ -0.77
GPHN-211ENST00000556020 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
GPHN-211ENST00000556020 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
GPHN-211ENST00000556020 IGLV5-39A0A0G2JS06 123 aa10.25□□□□□ -0.77
GPHN-211ENST00000556020 SCO1O75880 301 aa10.25□□□□□ -0.77
GPHN-211ENST00000556020 SNAPINO95295 136 aa10.25□□□□□ -0.77
GPHN-211ENST00000556020 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
GPHN-211ENST00000556020 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
GPHN-211ENST00000556020 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
GPHN-211ENST00000556020 IGLV5-37A0A075B6J1 123 aa10.23□□□□□ -0.77
GPHN-211ENST00000556020 C11orf86A6NJI1 115 aa10.23□□□□□ -0.77
GPHN-211ENST00000556020 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
GPHN-211ENST00000556020 SVBPQ8N300 66 aa10.23□□□□□ -0.77
GPHN-211ENST00000556020 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
GPHN-211ENST00000556020 IGKV2-28A0A075B6P5 120 aa10.22□□□□□ -0.77
GPHN-211ENST00000556020 IGKV2D-28P01615 120 aa10.22□□□□□ -0.77
GPHN-211ENST00000556020 UBE2AP49459 152 aa10.22□□□□□ -0.77
GPHN-211ENST00000556020 LPAP08519 4548 aa10.22□□□□□ -0.77
GPHN-211ENST00000556020 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
GPHN-211ENST00000556020 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
GPHN-211ENST00000556020 A0A087X002 238 aa10.19□□□□□ -0.78
GPHN-211ENST00000556020 TSPAN13O95857 204 aa10.19□□□□□ -0.78
GPHN-211ENST00000556020 PRR4Q16378 134 aa10.19□□□□□ -0.78
GPHN-211ENST00000556020 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
GPHN-211ENST00000556020 CRYGAP11844 174 aa10.17□□□□□ -0.78
GPHN-211ENST00000556020 VPREB1P12018 145 aa10.17□□□□□ -0.78
GPHN-211ENST00000556020 PRLHP81277 87 aa10.16□□□□□ -0.78
GPHN-211ENST00000556020 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
GPHN-211ENST00000556020 COX17Q14061 63 aa10.16□□□□□ -0.78
GPHN-211ENST00000556020 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 TMEM238C9JI98 176 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 LINC00158P58513 81 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
GPHN-211ENST00000556020 YPEL4Q96NS1 127 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms