RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 GDF5OSQ5U4N7 250 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 ZNF818PQ6ZRF7 136 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 ZNF826PQ6ZT77 177 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 C20orf197Q8N268 126 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 DIRC1Q969H9 104 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 TTTY10Q9BZA0 68 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 CYSTM1Q9H1C7 97 aa3□□□□□ -1.93
ATXN3-225ENST00000554214 RPP21Q9H633 154 aaKnown RBP3□□□□□ -1.93
ATXN3-225ENST00000554214 LYSTQ99698 3801 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 IGKV2D-26A0A0A0MRZ7 120 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 LINC01546A6NGU7 62 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 MRPL33O75394 65 aaKnown RBP2.99□□□□□ -1.93
ATXN3-225ENST00000554214 ARL14EPLP0DKL9 152 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 EIF4EBP1Q13541 118 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-225ENST00000554214 FXYD3Q14802 87 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 KISS1Q15726 138 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 FAM19A3Q7Z5A8 133 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 VMO1Q7Z5L0 202 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 Q8N9L7 120 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 ARHGAP5-AS1Q96IT6 56 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 LHFPL6Q9Y693 200 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 R4GMQ9 66 aa2.99□□□□□ -1.93
ATXN3-225ENST00000554214 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
ATXN3-225ENST00000554214 IGLV1-36A0A0B4J1U3 117 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 TMEM30CPA0ZSE6 113 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 PSPHP1O15172 72 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 SH2D1AO60880 128 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 ERC2-IT1O76042 136 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 IGHV3-33P01772 117 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 ZNF22P17026 224 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-225ENST00000554214 FGF12P61328 243 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 DEFB112Q30KQ8 113 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 NSUN5P1Q3KNT7 163 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 SPANXN5Q5MJ07 72 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 LINC01590Q5TEZ4 76 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 SPANXN1Q5VSR9 72 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 BRD3OSQ6XYD6 125 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 FAM223AQ8IWN6 122 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 ORMDL3Q8N138 153 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 DEFB108BQ8NET1 73 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 ZNF355PQ9NSJ1 428 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 TIMM8BQ9Y5J9 83 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-225ENST00000554214 U3KQK5 164 aa2.98□□□□□ -1.93
ATXN3-225ENST00000554214 WNK2Q9Y3S1 2297 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 A0A1B0GUT8 65 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 TMEM223A0PJW6 202 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 CLPSL1A2RUU4 121 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 ZNF815PA8K554 130 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 PLXNB1O43157 2135 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 COX7A2P2O60397 106 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 FSTL3O95633 263 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 DNAL4O96015 105 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 IGKV1-5P01602 117 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 IGLV2-8P01709 118 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 SAA1P0DJI8 122 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-225ENST00000554214 FXYD4P59646 89 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 KRTAP10-1P60331 282 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 ASB16-AS1Q495Z4 193 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 LYPD5Q6UWN5 251 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 Q6ZR03 302 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 DYNAPQ8N1N2 210 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 DNAH9Q9NYC9 4486 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 RYR1P21817 5038 aa2.97□□□□□ -1.93
ATXN3-225ENST00000554214 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-225ENST00000554214 A0A096LNJ9 63 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 TRAV40A0A0B4J280 105 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 FAM223BA6NKX1 122 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 F8VRH5 84 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 BUB1B-PAK6H3BSN5 160 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 K7EIL1 84 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 TRBV12-3P01733 135 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 BGLAPP02818 100 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 PRM2P04554 102 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 LINC00313P59037 77 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 PRB3Q04118 309 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-225ENST00000554214 KPRPQ5T749 579 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-225ENST00000554214 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 FAM216BQ8N7L0 139 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 SMCR5Q8TEV8 140 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 CYP4F30PQ9H0H9 118 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 PHLDA3Q9Y5J5 127 aa2.96□□□□□ -1.94
ATXN3-225ENST00000554214 IGKV1-9A0A0C4DH69 117 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 A0A1B0GW54 56 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 F8WEM9 126 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 K7EMI3 77 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 CD28P10747 220 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 IAPPP10997 89 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 MIFP14174 115 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 PRR3P79522 188 aaKnown RBP2.95□□□□□ -1.94
ATXN3-225ENST00000554214 C6orf99Q4VX62 202 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 LINC00269Q8N2A0 174 aa2.95□□□□□ -1.94
ATXN3-225ENST00000554214 PFN4Q8NHR9 129 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms