RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 CKS1BP61024 79 aa14.68□□□□□ -0.06
NEK9-203ENST00000553945 Q8IZM0 81 aa14.68□□□□□ -0.06
NEK9-203ENST00000553945 IGLV5-45A0A087WSX0 123 aa14.67□□□□□ -0.06
NEK9-203ENST00000553945 HSBP1O75506 76 aa14.66□□□□□ -0.06
NEK9-203ENST00000553945 KRTAP10-4P60372 401 aaPredicted RBP14.66□□□□□ -0.06
NEK9-203ENST00000553945 TRBV30A0A0K0K1B3 111 aa14.65□□□□□ -0.06
NEK9-203ENST00000553945 SMIM1B2RUZ4 78 aa14.65□□□□□ -0.06
NEK9-203ENST00000553945 SPINK8P0C7L1 97 aa14.64□□□□□ -0.07
NEK9-203ENST00000553945 IGLC3P0DOY3 106 aa14.64□□□□□ -0.07
NEK9-203ENST00000553945 C7orf33Q8WU49 177 aa14.64□□□□□ -0.07
NEK9-203ENST00000553945 TLX1NBP0CAT3 122 aa14.63□□□□□ -0.07
NEK9-203ENST00000553945 FAM19A2Q8N3H0 131 aa14.63□□□□□ -0.07
NEK9-203ENST00000553945 H3BRM9 83 aa14.62□□□□□ -0.07
NEK9-203ENST00000553945 C9orf116Q5BN46 136 aaPredicted RBP14.62□□□□□ -0.07
NEK9-203ENST00000553945 Q6ZRP5 223 aa14.62□□□□□ -0.07
NEK9-203ENST00000553945 MYCBP2O75592 4640 aa14.62□□□□□ -0.07
NEK9-203ENST00000553945 SERF1AO75920 110 aa14.61□□□□□ -0.07
NEK9-203ENST00000553945 COX7B2Q8TF08 81 aa14.61□□□□□ -0.07
NEK9-203ENST00000553945 IFI27L1Q96BM0 104 aa14.61□□□□□ -0.07
NEK9-203ENST00000553945 A0A1W2PNN7 141 aa14.6□□□□□ -0.07
NEK9-203ENST00000553945 GAGE2EQ4V326 116 aa14.6□□□□□ -0.07
NEK9-203ENST00000553945 GAGE2DQ9UEU5 116 aa14.6□□□□□ -0.07
NEK9-203ENST00000553945 F8VRH5 84 aa14.59□□□□□ -0.07
NEK9-203ENST00000553945 CHTOPQ9Y3Y2 248 aaKnown RBP14.59□□□□□ -0.07
NEK9-203ENST00000553945 PKHD1L1Q86WI1 4243 aa14.58□□□□□ -0.08
NEK9-203ENST00000553945 NDUFC2-KCTD14E9PQ53 114 aa14.58□□□□□ -0.08
NEK9-203ENST00000553945 ZNF22P17026 224 aaPredicted RBP14.58□□□□□ -0.08
NEK9-203ENST00000553945 CXCL5P42830 114 aa14.58□□□□□ -0.08
NEK9-203ENST00000553945 LINC00310P59036 64 aa14.58□□□□□ -0.08
NEK9-203ENST00000553945 C11orf86A6NJI1 115 aa14.57□□□□□ -0.08
NEK9-203ENST00000553945 TRAV12-1A0A0B4J245 112 aa14.55□□□□□ -0.08
NEK9-203ENST00000553945 TMEM170BQ5T4T1 132 aa14.55□□□□□ -0.08
NEK9-203ENST00000553945 NUPR1O60356 82 aa14.54□□□□□ -0.08
NEK9-203ENST00000553945 FAM168BA1KXE4 195 aa14.53□□□□□ -0.08
NEK9-203ENST00000553945 LEPROTL1O95214 131 aa14.53□□□□□ -0.08
NEK9-203ENST00000553945 HNRNPA3P51991 378 aaKnown RBP14.53□□□□□ -0.08
NEK9-203ENST00000553945 FLG2Q5D862 2391 aaPredicted RBP14.53□□□□□ -0.08
NEK9-203ENST00000553945 IGLV5-39A0A0G2JS06 123 aa14.52□□□□□ -0.09
NEK9-203ENST00000553945 H0Y8G0 127 aa14.51□□□□□ -0.09
NEK9-203ENST00000553945 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
NEK9-203ENST00000553945 PRR3P79522 188 aaKnown RBP14.5□□□□□ -0.09
NEK9-203ENST00000553945 PHF5AQ7RTV0 110 aaKnown RBP14.5□□□□□ -0.09
NEK9-203ENST00000553945 FABP4P15090 132 aa14.49□□□□□ -0.09
NEK9-203ENST00000553945 C9orf129Q5T035 196 aaKnown RBP14.49□□□□□ -0.09
NEK9-203ENST00000553945 HSPB8Q9UJY1 196 aa14.49□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BKO60814 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BJP06899 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BOP23527 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BBP33778 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BDP58876 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BCP62807 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST2H2BEQ16778 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BHQ93079 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BNQ99877 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 HIST1H2BMQ99879 126 aa14.48□□□□□ -0.09
NEK9-203ENST00000553945 XAGE1AQ9HD64 81 aa14.47□□□□□ -0.09
NEK9-203ENST00000553945 FAT3Q8TDW7 4589 aa14.45□□□□□ -0.1
NEK9-203ENST00000553945 ODF1Q14990 250 aa14.45□□□□□ -0.1
NEK9-203ENST00000553945 TMEM223A0PJW6 202 aa14.44□□□□□ -0.1
NEK9-203ENST00000553945 KRTAP7-1Q8IUC3 87 aa14.44□□□□□ -0.1
NEK9-203ENST00000553945 LRP1Q07954 4544 aaKnown RBP14.43□□□□□ -0.1
NEK9-203ENST00000553945 M0QXV9 152 aa14.43□□□□□ -0.1
NEK9-203ENST00000553945 PSORS1C2Q9UIG4 136 aa14.41□□□□□ -0.1
NEK9-203ENST00000553945 KRTAP29-1A8MX34 341 aaPredicted RBP14.4□□□□□ -0.1
NEK9-203ENST00000553945 J3QL48 77 aa14.4□□□□□ -0.1
NEK9-203ENST00000553945 S100A1P23297 94 aa14.4□□□□□ -0.1
NEK9-203ENST00000553945 PFN2P35080 140 aa14.4□□□□□ -0.1
NEK9-203ENST00000553945 SERTAD4-AS1Q5TG53 156 aa14.4□□□□□ -0.1
NEK9-203ENST00000553945 ZNF625Q96I27 306 aaPredicted RBP14.39□□□□□ -0.11
NEK9-203ENST00000553945 MAP1LC3CQ9BXW4 147 aa14.39□□□□□ -0.11
NEK9-203ENST00000553945 SFTA2Q6UW10 78 aa14.38□□□□□ -0.11
NEK9-203ENST00000553945 HERC1Q15751 4861 aa14.37□□□□□ -0.11
NEK9-203ENST00000553945 ATP6V1G1O75348 118 aa14.37□□□□□ -0.11
NEK9-203ENST00000553945 PLNP26678 52 aa14.37□□□□□ -0.11
NEK9-203ENST00000553945 PMCHL2Q9BQD1 86 aa14.37□□□□□ -0.11
NEK9-203ENST00000553945 ERG28Q9UKR5 140 aa14.37□□□□□ -0.11
NEK9-203ENST00000553945 DPM2O94777 84 aa14.36□□□□□ -0.11
NEK9-203ENST00000553945 OXTP01178 125 aa14.36□□□□□ -0.11
NEK9-203ENST00000553945 UBE2BP63146 152 aa14.36□□□□□ -0.11
NEK9-203ENST00000553945 KRTAP11-1Q8IUC1 163 aa14.36□□□□□ -0.11
NEK9-203ENST00000553945 C22orf24Q9Y442 160 aa14.36□□□□□ -0.11
NEK9-203ENST00000553945 C1orf137Q5JT78 98 aa14.35□□□□□ -0.11
NEK9-203ENST00000553945 DMBT1Q9UGM3 2413 aaPredicted RBP14.34□□□□□ -0.11
NEK9-203ENST00000553945 COX17Q14061 63 aa14.33□□□□□ -0.12
NEK9-203ENST00000553945 IGKCP01834 107 aa14.32□□□□□ -0.12
NEK9-203ENST00000553945 LBHQ53QV2 105 aaPredicted RBP14.31□□□□□ -0.12
NEK9-203ENST00000553945 SPINK6Q6UWN8 80 aa14.31□□□□□ -0.12
NEK9-203ENST00000553945 PLA2G2DQ9UNK4 145 aa14.31□□□□□ -0.12
NEK9-203ENST00000553945 SRSF9Q13242 221 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEK9-203ENST00000553945 COA6Q5JTJ3 125 aaKnown RBP14.3□□□□□ -0.12
NEK9-203ENST00000553945 SND1-IT1Q9HBX3 110 aa14.3□□□□□ -0.12
NEK9-203ENST00000553945 SYS1-DBNDD2H3BUS1 97 aa14.29□□□□□ -0.12
NEK9-203ENST00000553945 TP73-AS1Q9UF72 201 aa14.29□□□□□ -0.12
NEK9-203ENST00000553945 LEPROTO15243 131 aa14.28□□□□□ -0.12
NEK9-203ENST00000553945 LINC00158P58513 81 aa14.28□□□□□ -0.12
NEK9-203ENST00000553945 HERVK_113P61574 105 aa14.28□□□□□ -0.12
NEK9-203ENST00000553945 MRPL55Q7Z7F7 128 aaKnown RBP14.28□□□□□ -0.12
NEK9-203ENST00000553945 NDUFA12Q9UI09 145 aa14.27□□□□□ -0.13
NEK9-203ENST00000553945 A0A0U1RRA0 63 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms