RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 I3L3M4 83 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 K7EP34 96 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 MALP21145 153 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 RIGQ13278 110 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 SS18Q15532 418 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 A0A1B0GV72 72 aa6.23□□□□□ -1.41
ACTN1-210ENST00000553779 ATOH7Q8N100 152 aa6.23□□□□□ -1.41
ACTN1-210ENST00000553779 F8W1H4 67 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 FCER1GP30273 86 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 SMAGPQ0VAQ4 97 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 FOXI1Q12951 378 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 SIGMAR1Q99720 223 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 HIGD1BQ9P298 99 aa6.22□□□□□ -1.41
ACTN1-210ENST00000553779 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 FABP2P12104 132 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 CAMPP49913 170 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 Q6ZRP5 223 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 ERASQ7Z444 233 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 URB1-AS1Q96HZ7 61 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 VCX2Q9H322 139 aa6.21□□□□□ -1.42
ACTN1-210ENST00000553779 TNXBP22105 4242 aa6.2□□□□□ -1.42
ACTN1-210ENST00000553779 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
ACTN1-210ENST00000553779 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
ACTN1-210ENST00000553779 TAL2Q16559 108 aa6.2□□□□□ -1.42
ACTN1-210ENST00000553779 LRP2P98164 4655 aa6.2□□□□□ -1.42
ACTN1-210ENST00000553779 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 COX7A2LO14548 114 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 TSHBP01222 138 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
ACTN1-210ENST00000553779 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 C2orf91Q6ZV80 131 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 SPANXA1Q9NS26 97 aa6.19□□□□□ -1.42
ACTN1-210ENST00000553779 Q6ZVH6 145 aa6.18□□□□□ -1.42
ACTN1-210ENST00000553779 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 TRAV13-1A0A0B4J241 112 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 TRBV6-5A0A0K0K1A5 114 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 APOMO95445 188 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 ODF1Q14990 250 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 KIR2DL4Q99706 377 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
ACTN1-210ENST00000553779 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
ACTN1-210ENST00000553779 H3BUT2 72 aa6.16□□□□□ -1.42
ACTN1-210ENST00000553779 PPP1R17O96001 155 aa6.16□□□□□ -1.42
ACTN1-210ENST00000553779 RNASE13Q5GAN3 156 aaKnown RBP6.16□□□□□ -1.42
ACTN1-210ENST00000553779 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
ACTN1-210ENST00000553779 RNF213Q63HN8 5207 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 VCYO14598 125 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 HBDP02042 147 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 SPAG11BQ08648 103 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.42
ACTN1-210ENST00000553779 AMN1Q8IY45 258 aa6.15□□□□□ -1.42
ACTN1-210ENST00000553779 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 ATP5LO75964 103 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 C1orf137Q5JT78 98 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 C5orf38Q86SI9 138 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 ORMDL3Q8N138 153 aa6.14□□□□□ -1.43
ACTN1-210ENST00000553779 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
ACTN1-210ENST00000553779 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
ACTN1-210ENST00000553779 LINC00173Q6ZV60 143 aa6.13□□□□□ -1.43
ACTN1-210ENST00000553779 IFI27L1Q96BM0 104 aa6.13□□□□□ -1.43
ACTN1-210ENST00000553779 E9PLD3 99 aa6.12□□□□□ -1.43
ACTN1-210ENST00000553779 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
ACTN1-210ENST00000553779 C9orf116Q5BN46 136 aaPredicted RBP6.12□□□□□ -1.43
ACTN1-210ENST00000553779 Q6ZUT4 128 aa6.12□□□□□ -1.43
ACTN1-210ENST00000553779 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
ACTN1-210ENST00000553779 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
ACTN1-210ENST00000553779 NXT2Q9NPJ8 142 aaKnown RBP6.12□□□□□ -1.43
ACTN1-210ENST00000553779 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
ACTN1-210ENST00000553779 UBE2D4Q9Y2X8 147 aa6.12□□□□□ -1.43
ACTN1-210ENST00000553779 NDUFA1O15239 70 aa6.11□□□□□ -1.43
ACTN1-210ENST00000553779 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
ACTN1-210ENST00000553779 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
ACTN1-210ENST00000553779 LYRM7Q5U5X0 104 aa6.11□□□□□ -1.43
ACTN1-210ENST00000553779 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
ACTN1-210ENST00000553779 DIRC1Q969H9 104 aa6.11□□□□□ -1.43
ACTN1-210ENST00000553779 PRELID3AQ96N28 172 aa6.11□□□□□ -1.43
ACTN1-210ENST00000553779 A0A087WZ39 114 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 PRSS47A8MTI9 375 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-210ENST00000553779 CKS2P33552 79 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
ACTN1-210ENST00000553779 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-210ENST00000553779 CEND1Q8N111 149 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 CYSLTR1Q9Y271 337 aa6.1□□□□□ -1.43
ACTN1-210ENST00000553779 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms