RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 PRSS2P07478 247 aa9.49□□□□□ -0.89
BRF1-220ENST00000552127 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
BRF1-220ENST00000552127 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
BRF1-220ENST00000552127 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
BRF1-220ENST00000552127 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
BRF1-220ENST00000552127 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
BRF1-220ENST00000552127 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
BRF1-220ENST00000552127 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
BRF1-220ENST00000552127 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
BRF1-220ENST00000552127 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRF1-220ENST00000552127 Q8IZM0 81 aa9.48□□□□□ -0.89
BRF1-220ENST00000552127 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
BRF1-220ENST00000552127 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
BRF1-220ENST00000552127 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
BRF1-220ENST00000552127 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
BRF1-220ENST00000552127 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
BRF1-220ENST00000552127 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
BRF1-220ENST00000552127 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
BRF1-220ENST00000552127 CKS1BP61024 79 aa9.46□□□□□ -0.9
BRF1-220ENST00000552127 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
BRF1-220ENST00000552127 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
BRF1-220ENST00000552127 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
BRF1-220ENST00000552127 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
BRF1-220ENST00000552127 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
BRF1-220ENST00000552127 LINC00469Q8N7U9 141 aa9.44□□□□□ -0.9
BRF1-220ENST00000552127 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
BRF1-220ENST00000552127 M0QXV9 152 aa9.43□□□□□ -0.9
BRF1-220ENST00000552127 APOC3P02656 99 aa9.43□□□□□ -0.9
BRF1-220ENST00000552127 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
BRF1-220ENST00000552127 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
BRF1-220ENST00000552127 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
BRF1-220ENST00000552127 F8VRH5 84 aa9.42□□□□□ -0.9
BRF1-220ENST00000552127 PMVKQ15126 192 aa9.42□□□□□ -0.9
BRF1-220ENST00000552127 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
BRF1-220ENST00000552127 SNAPINO95295 136 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 CXCL5P42830 114 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 NDUFA5Q16718 116 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 KRTAP11-1Q8IUC1 163 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 TRAPPC1Q9Y5R8 145 aa9.41□□□□□ -0.9
BRF1-220ENST00000552127 FSIP2Q5CZC0 6907 aa9.4□□□□□ -0.9
BRF1-220ENST00000552127 SVBPQ8N300 66 aa9.4□□□□□ -0.9
BRF1-220ENST00000552127 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
BRF1-220ENST00000552127 A0A096LNJ9 63 aa9.39□□□□□ -0.91
BRF1-220ENST00000552127 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
BRF1-220ENST00000552127 UBE2BP63146 152 aa9.39□□□□□ -0.91
BRF1-220ENST00000552127 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
BRF1-220ENST00000552127 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
BRF1-220ENST00000552127 HBDP02042 147 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 LINC00614P0C842 121 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 SLC7A5P1Q8MH63 180 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 XAGE1AQ9HD64 81 aa9.37□□□□□ -0.91
BRF1-220ENST00000552127 H3BRM9 83 aa9.36□□□□□ -0.91
BRF1-220ENST00000552127 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
BRF1-220ENST00000552127 H0Y9J4 135 aa9.34□□□□□ -0.91
BRF1-220ENST00000552127 NDUFA6P56556 154 aa9.34□□□□□ -0.91
BRF1-220ENST00000552127 RAB5BP61020 215 aa9.34□□□□□ -0.91
BRF1-220ENST00000552127 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
BRF1-220ENST00000552127 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
BRF1-220ENST00000552127 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
BRF1-220ENST00000552127 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
BRF1-220ENST00000552127 ATP5LO75964 103 aa9.32□□□□□ -0.92
BRF1-220ENST00000552127 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
BRF1-220ENST00000552127 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
BRF1-220ENST00000552127 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
BRF1-220ENST00000552127 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
BRF1-220ENST00000552127 NUPR1O60356 82 aa9.3□□□□□ -0.92
BRF1-220ENST00000552127 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
BRF1-220ENST00000552127 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
BRF1-220ENST00000552127 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
BRF1-220ENST00000552127 CBLN2Q8IUK8 224 aa9.27□□□□□ -0.93
BRF1-220ENST00000552127 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
BRF1-220ENST00000552127 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.93
BRF1-220ENST00000552127 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
BRF1-220ENST00000552127 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
BRF1-220ENST00000552127 ZNF861PO60384 105 aa9.25□□□□□ -0.93
BRF1-220ENST00000552127 PFN2P35080 140 aa9.25□□□□□ -0.93
BRF1-220ENST00000552127 TMEM170BQ5T4T1 132 aa9.25□□□□□ -0.93
BRF1-220ENST00000552127 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
BRF1-220ENST00000552127 CHTOPQ9Y3Y2 248 aaKnown RBP9.25□□□□□ -0.93
BRF1-220ENST00000552127 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
BRF1-220ENST00000552127 NKAPP1Q8N9T2 125 aa9.24□□□□□ -0.93
BRF1-220ENST00000552127 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
BRF1-220ENST00000552127 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
BRF1-220ENST00000552127 RPL37AP8A6NKH3 93 aa9.23□□□□□ -0.93
BRF1-220ENST00000552127 BCE1O60756 84 aa9.23□□□□□ -0.93
BRF1-220ENST00000552127 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
BRF1-220ENST00000552127 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
BRF1-220ENST00000552127 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
BRF1-220ENST00000552127 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
BRF1-220ENST00000552127 COX17Q14061 63 aa9.22□□□□□ -0.93
BRF1-220ENST00000552127 HSBP1O75506 76 aa9.21□□□□□ -0.94
BRF1-220ENST00000552127 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
BRF1-220ENST00000552127 PRR4Q16378 134 aa9.21□□□□□ -0.94
BRF1-220ENST00000552127 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
BRF1-220ENST00000552127 SND1-IT1Q9HBX3 110 aa9.21□□□□□ -0.94
BRF1-220ENST00000552127 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
BRF1-220ENST00000552127 SCO1O75880 301 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms