RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 NOTCH3Q9UM47 2321 aa16.51■□□□□ 0.23
NPAS3-211ENST00000551634 LINC01006Q8NI28 216 aa16.51■□□□□ 0.23
NPAS3-211ENST00000551634 SETD2Q9BYW2 2564 aaPredicted RBP16.51■□□□□ 0.23
NPAS3-211ENST00000551634 GAGE2AQ6NT46 116 aa16.51■□□□□ 0.23
NPAS3-211ENST00000551634 A0A087WYN8 130 aa16.5■□□□□ 0.23
NPAS3-211ENST00000551634 LINC00959A0A1B0GUT2 108 aa16.5■□□□□ 0.23
NPAS3-211ENST00000551634 C5orf38Q86SI9 138 aa16.5■□□□□ 0.23
NPAS3-211ENST00000551634 HIVEP1P15822 2718 aa16.5■□□□□ 0.23
NPAS3-211ENST00000551634 OBSCN-AS1Q96MR7 158 aa16.47■□□□□ 0.23
NPAS3-211ENST00000551634 PFN2P35080 140 aa16.47■□□□□ 0.23
NPAS3-211ENST00000551634 PAX4O43316 350 aa16.47■□□□□ 0.23
NPAS3-211ENST00000551634 KIR2DL5BQ8NHK3 375 aa16.47■□□□□ 0.23
NPAS3-211ENST00000551634 C6orf226Q5I0X4 101 aa16.46■□□□□ 0.23
NPAS3-211ENST00000551634 WFDC11Q8NEX6 87 aa16.46■□□□□ 0.23
NPAS3-211ENST00000551634 RNASE1P07998 156 aaKnown RBP16.45■□□□□ 0.22
NPAS3-211ENST00000551634 TMEM126AQ9H061 195 aa16.45■□□□□ 0.22
NPAS3-211ENST00000551634 LY6G6DO95868 133 aa16.45■□□□□ 0.22
NPAS3-211ENST00000551634 A0A1B0GUV1 79 aa16.44■□□□□ 0.22
NPAS3-211ENST00000551634 LINC01561Q8N1V8 128 aa16.43■□□□□ 0.22
NPAS3-211ENST00000551634 LINC00612Q8N6U2 182 aa16.43■□□□□ 0.22
NPAS3-211ENST00000551634 SS18Q15532 418 aa16.42■□□□□ 0.22
NPAS3-211ENST00000551634 Q8IZM0 81 aa16.42■□□□□ 0.22
NPAS3-211ENST00000551634 LECT2O14960 151 aa16.42■□□□□ 0.22
NPAS3-211ENST00000551634 JMJD1CQ15652 2540 aa16.42■□□□□ 0.22
NPAS3-211ENST00000551634 NF1P21359 2839 aa16.41■□□□□ 0.22
NPAS3-211ENST00000551634 OR13C6PQ8NH95 151 aa16.41■□□□□ 0.22
NPAS3-211ENST00000551634 KLK5Q9Y337 293 aaPredicted RBP16.41■□□□□ 0.22
NPAS3-211ENST00000551634 F8P00451 2351 aa16.4■□□□□ 0.22
NPAS3-211ENST00000551634 C3orf22Q8N5N4 141 aa16.39■□□□□ 0.22
NPAS3-211ENST00000551634 DEFB130BP0DP73 79 aa16.39■□□□□ 0.21
NPAS3-211ENST00000551634 DEFB130AP0DP74 79 aa16.39■□□□□ 0.21
NPAS3-211ENST00000551634 C14orf132Q9NPU4 83 aa16.39■□□□□ 0.21
NPAS3-211ENST00000551634 UQCRQO14949 82 aa16.39■□□□□ 0.21
NPAS3-211ENST00000551634 GYPEP15421 78 aa16.39■□□□□ 0.21
NPAS3-211ENST00000551634 C9orf129Q5T035 196 aaKnown RBP16.39■□□□□ 0.21
NPAS3-211ENST00000551634 XCL1P47992 114 aa16.37■□□□□ 0.21
NPAS3-211ENST00000551634 HIST1H4AP62805 103 aaKnown RBP16.36■□□□□ 0.21
NPAS3-211ENST00000551634 A0A1B0GX51 115 aa16.36■□□□□ 0.21
NPAS3-211ENST00000551634 ORMDL1Q9P0S3 153 aa16.35■□□□□ 0.21
NPAS3-211ENST00000551634 CFAP161Q6P656 301 aa16.34■□□□□ 0.21
NPAS3-211ENST00000551634 LINC00526Q96FQ7 95 aa16.34■□□□□ 0.21
NPAS3-211ENST00000551634 C11orf68Q9H3H3 251 aaKnown RBP16.34■□□□□ 0.21
NPAS3-211ENST00000551634 Q6JHZ5 121 aa16.34■□□□□ 0.21
NPAS3-211ENST00000551634 SMIM20Q8N5G0 67 aa16.34■□□□□ 0.21
NPAS3-211ENST00000551634 C9orf153Q5TBE3 101 aa16.33■□□□□ 0.21
NPAS3-211ENST00000551634 PRO0255Q9UI72 69 aa16.33■□□□□ 0.21
NPAS3-211ENST00000551634 LINC00167Q96N53 147 aa16.33■□□□□ 0.2
NPAS3-211ENST00000551634 KRTAP1-1Q07627 177 aa16.32■□□□□ 0.2
NPAS3-211ENST00000551634 ATOX1O00244 68 aa16.32■□□□□ 0.2
NPAS3-211ENST00000551634 NDUFC2O95298 119 aa16.32■□□□□ 0.2
NPAS3-211ENST00000551634 COX17Q14061 63 aa16.31■□□□□ 0.2
NPAS3-211ENST00000551634 LINC00846Q9NV44 126 aa16.31■□□□□ 0.2
NPAS3-211ENST00000551634 SMIM9A6NGZ8 99 aa16.31■□□□□ 0.2
NPAS3-211ENST00000551634 NCR3O14931 201 aa16.3■□□□□ 0.2
NPAS3-211ENST00000551634 COX7CP15954 63 aa16.3■□□□□ 0.2
NPAS3-211ENST00000551634 SLPIP03973 132 aa16.29■□□□□ 0.2
NPAS3-211ENST00000551634 X6R8D5 127 aa16.28■□□□□ 0.2
NPAS3-211ENST00000551634 NANOS2P60321 138 aaKnown RBP16.27■□□□□ 0.2
NPAS3-211ENST00000551634 CD164L2Q6UWJ8 174 aa16.27■□□□□ 0.2
NPAS3-211ENST00000551634 KIAA0087Q14695 138 aa16.27■□□□□ 0.19
NPAS3-211ENST00000551634 C3orf56Q8N813 242 aa16.27■□□□□ 0.19
NPAS3-211ENST00000551634 JMJD7-PLA2G4BH0Y9G9 81 aa16.26■□□□□ 0.19
NPAS3-211ENST00000551634 CLPSL2Q6UWE3 100 aa16.26■□□□□ 0.19
NPAS3-211ENST00000551634 C2orf48Q96LS8 159 aa16.26■□□□□ 0.19
NPAS3-211ENST00000551634 CCKP06307 115 aa16.25■□□□□ 0.19
NPAS3-211ENST00000551634 Q8N814 137 aa16.25■□□□□ 0.19
NPAS3-211ENST00000551634 IGHV4-28A0A0C4DH34 117 aa16.25■□□□□ 0.19
NPAS3-211ENST00000551634 HILS1P60008 231 aa16.25■□□□□ 0.19
NPAS3-211ENST00000551634 RPL18AQ02543 176 aaKnown RBP16.25■□□□□ 0.19
NPAS3-211ENST00000551634 LYRM9A8MSI8 78 aa16.23■□□□□ 0.19
NPAS3-211ENST00000551634 TMEM256-PLSCR3K7ERE1 68 aa16.23■□□□□ 0.19
NPAS3-211ENST00000551634 IGKV3D-7A0A0C4DH55 119 aa16.22■□□□□ 0.19
NPAS3-211ENST00000551634 CRYGAP11844 174 aa16.22■□□□□ 0.19
NPAS3-211ENST00000551634 LINC00269Q8N2A0 174 aa16.22■□□□□ 0.19
NPAS3-211ENST00000551634 FN1P02751 2386 aaKnown RBP16.22■□□□□ 0.19
NPAS3-211ENST00000551634 CHCHD10Q8WYQ3 142 aaPredicted RBP16.21■□□□□ 0.19
NPAS3-211ENST00000551634 A0A096LPF7 62 aa16.2■□□□□ 0.18
NPAS3-211ENST00000551634 S100A7L2Q5SY68 101 aa16.2■□□□□ 0.18
NPAS3-211ENST00000551634 PRR3P79522 188 aaKnown RBP16.19■□□□□ 0.18
NPAS3-211ENST00000551634 LINC00482Q8N8I6 264 aa16.19■□□□□ 0.18
NPAS3-211ENST00000551634 SMR3AQ99954 134 aa16.17■□□□□ 0.18
NPAS3-211ENST00000551634 REG3AQ06141 175 aa16.17■□□□□ 0.18
NPAS3-211ENST00000551634 MUC7Q8TAX7 377 aa16.17■□□□□ 0.18
NPAS3-211ENST00000551634 ANGP03950 147 aaKnown RBP16.15■□□□□ 0.18
NPAS3-211ENST00000551634 ATP5EP2Q5VTU8 51 aa16.14■□□□□ 0.17
NPAS3-211ENST00000551634 NSD1Q96L73 2696 aaPredicted RBP16.14■□□□□ 0.17
NPAS3-211ENST00000551634 SERP2Q8N6R1 65 aa16.13■□□□□ 0.17
NPAS3-211ENST00000551634 KRTAP10-3P60369 221 aa16.12■□□□□ 0.17
NPAS3-211ENST00000551634 IGLV10-54A0A075B6I4 117 aa16.11■□□□□ 0.17
NPAS3-211ENST00000551634 C6orf99Q4VX62 202 aa16.11■□□□□ 0.17
NPAS3-211ENST00000551634 ATRQ13535 2644 aa16.11■□□□□ 0.17
NPAS3-211ENST00000551634 C9orf116Q5BN46 136 aaPredicted RBP16.11■□□□□ 0.17
NPAS3-211ENST00000551634 HIVEP2P31629 2446 aa16.11■□□□□ 0.17
NPAS3-211ENST00000551634 ANK3Q12955 4377 aaKnown RBP16.11■□□□□ 0.17
NPAS3-211ENST00000551634 A0A087WVE0 104 aa16.1■□□□□ 0.17
NPAS3-211ENST00000551634 USP17L23D6RBM5 183 aa16.1■□□□□ 0.17
NPAS3-211ENST00000551634 LINC00575Q6W349 94 aa16.09■□□□□ 0.17
NPAS3-211ENST00000551634 LYPD5Q6UWN5 251 aa16.09■□□□□ 0.17
NPAS3-211ENST00000551634 Q8N3U1 123 aa16.07■□□□□ 0.16
NPAS3-211ENST00000551634 Q8NDZ9 215 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms